Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01472 ATGGAAAAGGAGCCACTGCTCCCATATTTCAGCCCAAGGAAGAAGCTTTCGCCATTGTCACATTCGCTTTTTCCTTTACCTGAAAATGATGAAATGGTTCTTCCTGTTACCCCTTCTGAGTTCAAAGATCGTCTCATCTTTGGTCCTACACCAATTGATTCTTCACCTTTGGCTGAAGCTTTAACACTTTCACGTAATTCACCAAAATCTGCTTGTTCCTCTTCACAAGATTTTGTTGATTCTTCATCACAACAATGGCTTATTGATCCTAATTATTCAAGGGGCAAAACAAATCTTCATCGTTCAAAAACTGCACCTGCTATGGCTGTTATCAGTGATTTCACTCATCGTGCATCTGTTAAAAGACCTCAATTTGGTAGCCAATCTATTGTTCATCAAGCTGTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTTATTTATTGGTTCAATCGTAATGATTTTACATCAACAGAAACTCATGTTATTGTAGATGCATTGTATTTTTGTATAGTTACAATGTGCACAATAGGTTATGGTGATATTACACCTAATAGTACTGCAACCAAGATTTTCTCTATACTGTTTGTGttgattggttttggttttattGATATATTGCTTAGTGGAATGGTTAGTTATGTTCTTGATTTGCAAGAGAATCATTTGTTGAGGGCAGTGAAGGGAAGAGGTGGGAAAGATGGTAGGTCATATTTAGTTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCATTGGCACTTTTGGTTGTGGTACTTTGTATTGGACTTGGTGTAGGGGTTATGCATTTTGTGGAAAGGCTTGGATGGGTGGATTCTTTTTATCTTTCAGTTATGTCCGTTACAACGGTTGGATATGGTGATCATGCTTTTAAGACCATGCATGGTCGTATTTTTGCTGCAATTTGGTTGCTTGTGTCGACGCTTGCCGTGGCCCGAGCATTCCTTTATTTGGCTGAGGCGAGAGTGGATAAACGGCATAGAAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCTGACATAGACAATAATGGATTTGTGAGTAAATCAGAATATGTTATATATAAGCTCAAGGAGATGGGAAAAGTGACAGAGAAGGACATCATGCAGGTCAGTGAGAAATTCGATAGACTAGATACCGGCAACTGtggaaaaataacacttggtgaTCTCATGGAGAGTCAAAATTGA 1245 0.3807 MEKEPLLPYFSPRKKLSPLSHSLFPLPENDEMVLPVTPSEFKDRLIFGPTPIDSSPLAEALTLSRNSPKSACSSSQDFVDSSSQQWLIDPNYSRGKTNLHRSKTAPAMAVISDFTHRASVKRPQFGSQSIVHQAVILLVLYLALGVVIYWFNRNDFTSTETHVIVDALYFCIVTMCTIGYGDITPNSTATKIFSILFVLIGFGFIDILLSGMVSYVLDLQENHLLRAVKGRGGKDGRSYLVDVKKGRMRIRMKVALALLVVVLCIGLGVGVMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMQVSEKFDRLDTGNCGKITLGDLMESQN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01472 414 Pfam Ion channel 136 216 IPR013099 -
Tsu02g01472 414 Pfam Ion channel 258 329 IPR013099 -
Tsu02g01472 414 ProSitePatterns EF-hand calcium-binding domain. 358 370 IPR018247 -
Tsu02g01472 414 PRINTS Two pore domain K+ channel signature 292 301 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tsu02g01472 414 PRINTS Two pore domain K+ channel signature 173 201 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tsu02g01472 414 SUPERFAMILY Voltage-gated potassium channels 244 351 - -
Tsu02g01472 414 Gene3D - 128 227 - -
Tsu02g01472 414 Gene3D - 240 349 - -
Tsu02g01472 414 PANTHER TWO-PORE POTASSIUM CHANNEL 3 80 409 - -
Tsu02g01472 414 SUPERFAMILY Voltage-gated potassium channels 127 216 - -
Tsu02g01472 414 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 80 409 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tsu02g01472 414 SUPERFAMILY EF-hand 349 410 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01472 Tsu-Chr2 12863992 12868933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01472 4 411 Ion Channels AT4G18160 61.772 5.91e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01472 K05389 - gmx:100804249 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01472 02 12863992 12868933 Tsu02g01472 02 12863992 12868933 ECH