Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01471 ATGTCTGATGAACATAGACAACCCTACTTCCAAAACTTTATGCTAGATCATAATAATTATCATCAAAAAACAGATCAAGGATCTATTAATAACATGTTTtgtgaaaaacaattttctacaAATCCTAATTTAGGTTCATCTTATGAATGTTTTGATCCATCATCTTATAATATGAGTTTCACTGAATGTTTACAAGGAGGAAACATGGATCATCACTACAATTCATCTTCACTCGCGAATAATTCTCCTTTCGGAGTATTATCTCCTTCTTCATCCGAAGTTTTTTCATCTGTTGATCAAGGAAATAATCAAAAGCCGGAAGTAGTTGGTGGTGAAACCCTTCTTAACTCGTCTATCTCTAATTCATCATCTTCTGAAGccggaggaggaggaggagcagaagaagaagattctggcaagaaaaagaaaaatattggaCAAGTTAAAGAAGAACCAGGACAAGAAGCCACCAAAAATGGGAACAACAAAGTGGAGAAGAAGAAAGGAGAGAAGAAGCAAAAGGAACCAAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCAACTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCTGTCAAAAATAGTCCATACCCTAGGAGCTATTACAGGTGTACAACACAGAAGTGTACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCACTTAGAGGCAATGCGGCTTCAATGTTCACACCTTCTCATTTGCTATCTACACCCACCCCTTTTACATCATCTGGGTCAAACTATAATTTTCCTCAAGAACTTCTTCTCCACATGCACCATAATcaaccaacaacaacatatGCTACTAGTAATGCTGCTTCCCTTTATTCTTCATCACACAACAACAATATTAACAACTCTCTTTTTCAACAATATCAACAACAAGTACAACTTCCTAATCATGATCAATATGGACTTCTTCAAGATATTGTCCCTTCCATGTTCCTTAATAGAACCAACCATAACTAA 1062 0.3277 MSDEHRQPYFQNFMLDHNNYHQKTDQGSINNMFCEKQFSTNPNLGSSYECFDPSSYNMSFTECLQGGNMDHHYNSSSLANNSPFGVLSPSSSEVFSSVDQGNNQKPEVVGGETLLNSSISNSSSSEAGGGGGAEEEDSGKKKKNIGQVKEEPGQEATKNGNNKVEKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAASMFTPSHLLSTPTPFTSSGSNYNFPQELLLHMHHNQPTTTYATSNAASLYSSSHNNNINNSLFQQYQQQVQLPNHDQYGLLQDIVPSMFLNRTNHN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01471 353 SMART WRKY_cls 189 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g01471 353 MobiDBLite consensus disorder prediction 88 178 - -
Tsu02g01471 353 Gene3D WRKY domain 174 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g01471 353 ProSiteProfiles WRKY domain profile. 184 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g01471 353 MobiDBLite consensus disorder prediction 88 128 - -
Tsu02g01471 353 SUPERFAMILY WRKY DNA-binding domain 181 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g01471 353 PANTHER WRKY TRANSCRIPTION FACTOR 81 1 345 - -
Tsu02g01471 353 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 345 IPR044810 GO:0003700
Tsu02g01471 353 MobiDBLite consensus disorder prediction 160 178 - -
Tsu02g01471 353 MobiDBLite consensus disorder prediction 133 149 - -
Tsu02g01471 353 Pfam WRKY DNA -binding domain 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01471 Tsu-Chr2 12843805 12845763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01471 51 347 WRKY Transcription Factor Family AT4G18170 50.162 7.27e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g01471 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01471 - - cam:101497541 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01471 02 12843805 12845763 Tsu02g01471 02 12843805 12845763 ECH