Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01465 atggccgCATCATCCATGGCTCTCACTTCACCTGCCTTGGCTGGCAAGCCAGTCAAGTTGACCCCTTCAAGCCAAGAATTGGGAGCTGCAAAGTTTACCATGAGGAAGGCTGCTACCACCAAGAAAGTAGCCTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGCCCCCGTCTTACTTGACTGGAGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGACTTTCTGCTGACCCAGAGACATTCGCCAAGAACCGTGAGCTTGAAGTTATCCACTCTAGGTGGGCCATGTTGGGAGCCTTGGGATGTGTTTTCCCAGAGCTTTTGTCTCGCAACGGTGTTAAATTCGGTGAGGCTGTTTGGTTTAAGGCCGGATCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGTATCCTTGCCATCTGGGCCACTCAAGTTATCTTGATGGGCGCAGTTGAAGGATACCGTATTGCTGGTGGGCCTCTTGGTGAAGTAGTTGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTGGGCCTAGCCGACGACCCAGAAGCTTTTGCAGAATTAAAGGTTAAGGAACTCAAAAACGGTAGGTTAGCCATGTTCTCTATGTTTGGATTCTTTGTCCAGGCTATTGTGACCGGAAAGGGTCCTTTGGAGAACCTTGCTGACCATCTTTCCGACCCAGTCAACAACAACGCCTGGGCCTACGCCACCAACTTTGTTCCCGGAAAGTGA 801 0.5081 MAASSMALTSPALAGKPVKLTPSSQELGAAKFTMRKAATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01465 266 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Tsu02g01465 266 Gene3D Chlorophyll a/b binding protein domain 57 259 - -
Tsu02g01465 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 266 IPR001344 GO:0009765|GO:0016020
Tsu02g01465 266 SUPERFAMILY Chlorophyll a-b binding protein 49 263 - -
Tsu02g01465 266 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01465 Tsu-Chr2 12793787 12794587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01465 1 266 Chloroplast and Mitochondria Gene Families AT2G34430 87.687 4.52e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01465 K08912 - jre:108990271 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01465 02 12793787 12794587 Tsu02g01465 02 12793787 12794587 ECH