Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01463 ATGTTATCTCTAAACCTTAAATTGACCATAGTCATACTCATTTCAATTCTATCCATTATTGTCTCACATgctcaaacaaaaacaacaattgaaGTTGAAATTGAAGCATTAAAAGAATTCAAAAAATCCATAACAAATGATCCAAACAAAATCCTTGCTAATTGGATTGACACAAAACCTCATTGTAACTGGTCAGGAATTGAATGTAACAACCAAACATCATCAAAACAACATGTTATATCAATTTCACTTTTTGAACTTCAACTTGAAGGTGAAATTTCACCATTTATTGGTAACATTTCAACTCTTCAACTTCTTGATTTAACTTCAAATTCATTCACTGGTCAAATTCCACCACAAATTAGTCAATGCACTCAACTCACAACACTTTATCTTGCTGAAAATTCTCTCTCAGGTTCAATTCCTCATGAATTAGGTAACCTAAAAAATTTGCAATATTTGGATTTAGGTAGTAACCAATTCAATGGAACTTTACCTAATAGTATATTCAATGTTACTTCCTTGTTAGGTTTTgctttcaatttcaataatcTTAGTGGTACAATCCCTTCAAATGTAGGAAATTTAGTTAATGTTATACAAATTGCAGGATTTGGGAATAGTTTTGTTGGATCTATACCTGTTTCTATAGGTAAATTAGGGTTTTTGAAATCTCTtgattttagtcaaaataagtTATCTGGTGTGATTCCTAAAGAGATTGGAAATTtaacaaatttacaaaatcTTATCTTATTTGATAATTCATTGAGTGGAAAAATTCCTTCTGAGATTGGTCATTGTAGAAATCTTGTTTTGCTTGAGTTATATGAGAATGATTTCATTGGAAATATTCCTCATGAGTTAGGAAATTTAGTTCAATTAGAAACATTGAGGTTATATGGTAATAAGTTGAATTCAACTATACCAGATTCTATATTTAAGTTGAAATCATTAACACATTTAGGATTATCAGAAAATAACTTAGAGGGAACAATTTCTTCTGAGATTGGATCTTTGAGTTCATTAAAAGTGTTAACTTTGCATTTAAATAAGTTTACCGGGACGATTCCTTCATCGGTAACAAATTTGAGAAACTTGACATCTCTTTCCATGAGTCAGAATCTTCTTTCTGGTGAAATTCCTTCAAACTTAGGTGTGCTTCATAATTTGAAGTTTCTTGTCTTGAATAGAAATTTTTTACATGGTCCTGTTCCTCCTAGCATTATCAATTGTACTAGTTTGGTAAATGTGAGTTTATCTTTTAATGCATTATCTGGGAAAATTCCCGAGGGTTTTTCAAAGCTACCTAATTTGACCTTTTTGTCTCTTGCATCCAACAAAATGAGTGGTGAAATTCCAGATGATCTCTTTAACTGTTCAAACCTTAGTACTCTAAGTTTGGCGGAAAACAACTTCAGTGGATCGATAAAATCTGGTATCAAGAATCTGTTTAATCTCATGCGTTTGCAGCTGAATGTAAATGCTTTCGTAGGACCGATTCCACCAGAGATTGGAAACTTGAATAAACTCATCTCTTTGTCTCTTTCTGAAAATAGATTTTCAGGTCATATTCCAATAGAATTGTCAAAACTTTCTCTCCTCCAGGGACTTTCTCTTCATGACAATGTATTAGAAGGTACAATACCTGATAAACTTTCGGAACTAAAACAATTGACTGAACTTTTGCTGAATGAAAACAAGTTGGTTGGTCAAATACCGGATTCTATCTCAACGCTTGAGATGCTTTCATATTTGGATCTTCATGGAAACAAACTTAACGGTTCCATTCCGAAAAACATGGGGAAGCTTGATCATCTTTTAATGTTGGATCTCTCTCACAACCAACTCACAGGATCGATTCCCGGAGATGTCATTGCACACTTCAAAGACATGCAGATGTATCTTAACCTTTCTTACAATCATTTTGTTGGAAATGTTCCTTTTGAGTTGGGGATGTTGGAAATGGCACAAGCAATTGATGTTTCAAACAATAATCTTTCAGGCGTCCTTCCAAAGACACTTGTGGGGTGCAGAAATATGTTCAGCCTTGATTTCTCAGGAAACAATATTTCAGGTCCTATTCCTGCTGAAGTTTTTAGTGGTATGGACTTGCTTCAAAGCTTAAATCTTTCAAGAAATCATTTAGATGGTGAAATCCCTGAAAGCTTGTCACAGCTTAAGAATCTTAGTTCCTTAGATCTTTCTCAGAATAACTTGAAGGGAAGTATTCCTGAGGGATTTGCCAATCTTTCCAACTTGATGAAGGTCAACTTTTCTTTCAATCAACTTGAAGGTCCTGTACCTTTGACCGGAATCTTTGCGCATATGAATGCATCTAGTATGATGGGAAACCAGGCTCTTTGTGGAGCAAAATTCCTAAGGCCATGCAGAGAGAATGATCATTCAGTATCCAAGAAGGCCATAGCTATCATTGCTGCCCTCGGATCTCTTGCTGTACTTCTACTTGTAGTCCTTCTAATTTTATATCTCAACCGAGGCACCATATTTGGTAATTCTGCAAAGACTAGTGATACTGAGAATCATGAATCAGTACATGGTTCATCGATGGGTCTTAAAAGATTCAGTCCAAAGGAATTAGAATATGCCACCGGTTGTTTCAGCTCAGACTACATCATCGGTGCTAGCAGTTTGAGCACCGTTTACAAGGGTCAATTTGAAGATGGTCAGGTTGTAGCCATAAAAAGCTTGAATTTGCACCAATTCTCTGCTAATACCGACAAGATCTTCAAGAGAGAAGCCAGTACCTTGTGCCAGCTGAGACATAGGAATTTGGTTAAGATACTTGGATATGCTTGGGAAAGTCAGAAAATAAAGGCTTTAGTTTTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACATGATAAAGAGGTAGATCAGTCGAGGTGGACATTATCTGAAAGAGTCCGCGTTTTCATTTCTATCGCGAGTGGATTGGATTACTTGCACTCTGGCTATGGTTCTCCCATAGTTCACTGTGATCTAAAGCCTTCTAACATCCTTTTAGATAGAGATTTTGAAGCTCATGTCAGTGATTTCGGAACAGCTCGAATACTTGGTCTTCACCTGCAGGATGGTAGTGCCCTTTCCTCAACGGCAGCTTTGCAAGGCACAGTTGGTTATTTGGCACCAGAATTTGCTTACATGAAGAAAGTAACGACTAAAGTGGATGTGTTCAGCTTTGGCATCATAGTAATGGAATTTCTAACAAGAAAAAGGCCAACAGGGCTCTCAGAAGAGGATAGTTCGCTAATCAGTTTGCGTGATGTAGTGGCAAAAGCCGTTGCAAATGGAACGGAACAGATTATCAACATTGTGGACCCTGAATTGATCACAAAAGACCATGGAGAAGTGTTGGAAGAGCTCTTTAAGCTATCATTGTGCTGCACCTTCTCTGATCCTGAACATCGACCTAATATGAATGAAGTTTTATCTGCACTTGTGAAGCTTAAGACAGCAAGATAG 3492 0.3565 MLSLNLKLTIVILISILSIIVSHAQTKTTIEVEIEALKEFKKSITNDPNKILANWIDTKPHCNWSGIECNNQTSSKQHVISISLFELQLEGEISPFIGNISTLQLLDLTSNSFTGQIPPQISQCTQLTTLYLAENSLSGSIPHELGNLKNLQYLDLGSNQFNGTLPNSIFNVTSLLGFAFNFNNLSGTIPSNVGNLVNVIQIAGFGNSFVGSIPVSIGKLGFLKSLDFSQNKLSGVIPKEIGNLTNLQNLILFDNSLSGKIPSEIGHCRNLVLLELYENDFIGNIPHELGNLVQLETLRLYGNKLNSTIPDSIFKLKSLTHLGLSENNLEGTISSEIGSLSSLKVLTLHLNKFTGTIPSSVTNLRNLTSLSMSQNLLSGEIPSNLGVLHNLKFLVLNRNFLHGPVPPSIINCTSLVNVSLSFNALSGKIPEGFSKLPNLTFLSLASNKMSGEIPDDLFNCSNLSTLSLAENNFSGSIKSGIKNLFNLMRLQLNVNAFVGPIPPEIGNLNKLISLSLSENRFSGHIPIELSKLSLLQGLSLHDNVLEGTIPDKLSELKQLTELLLNENKLVGQIPDSISTLEMLSYLDLHGNKLNGSIPKNMGKLDHLLMLDLSHNQLTGSIPGDVIAHFKDMQMYLNLSYNHFVGNVPFELGMLEMAQAIDVSNNNLSGVLPKTLVGCRNMFSLDFSGNNISGPIPAEVFSGMDLLQSLNLSRNHLDGEIPESLSQLKNLSSLDLSQNNLKGSIPEGFANLSNLMKVNFSFNQLEGPVPLTGIFAHMNASSMMGNQALCGAKFLRPCRENDHSVSKKAIAIIAALGSLAVLLLVVLLILYLNRGTIFGNSAKTSDTENHESVHGSSMGLKRFSPKELEYATGCFSSDYIIGASSLSTVYKGQFEDGQVVAIKSLNLHQFSANTDKIFKREASTLCQLRHRNLVKILGYAWESQKIKALVLEYMENGNLDSIIHDKEVDQSRWTLSERVRVFISIASGLDYLHSGYGSPIVHCDLKPSNILLDRDFEAHVSDFGTARILGLHLQDGSALSSTAALQGTVGYLAPEFAYMKKVTTKVDVFSFGIIVMEFLTRKRPTGLSEEDSSLISLRDVVAKAVANGTEQIINIVDPELITKDHGEVLEELFKLSLCCTFSDPEHRPNMNEVLSALVKLKTAR 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01463 1163 SUPERFAMILY L domain-like 530 792 - -
Tsu02g01463 1163 Gene3D Ribonuclease Inhibitor 480 633 IPR032675 -
Tsu02g01463 1163 Gene3D Ribonuclease Inhibitor 200 361 IPR032675 -
Tsu02g01463 1163 Pfam Leucine rich repeat 659 716 IPR001611 GO:0005515
Tsu02g01463 1163 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Tsu02g01463 1163 Pfam Protein kinase domain 878 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01463 1163 Gene3D Transferase(Phosphotransferase) domain 1 953 1163 - -
Tsu02g01463 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 1 300 - -
Tsu02g01463 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 370 1159 - -
Tsu02g01463 1163 CDD STKc_IRAK 880 1159 - -
Tsu02g01463 1163 SUPERFAMILY RNI-like 62 378 - -
Tsu02g01463 1163 SUPERFAMILY Protein kinase-like (PK-like) 849 1158 IPR011009 -
Tsu02g01463 1163 SMART LRR_sd22_2 556 579 - -
Tsu02g01463 1163 SMART LRR_sd22_2 727 753 - -
Tsu02g01463 1163 SMART LRR_sd22_2 220 246 - -
Tsu02g01463 1163 SMART LRR_sd22_2 604 625 - -
Tsu02g01463 1163 SMART LRR_sd22_2 364 387 - -
Tsu02g01463 1163 SMART LRR_sd22_2 148 174 - -
Tsu02g01463 1163 Gene3D Ribonuclease Inhibitor 30 199 IPR032675 -
Tsu02g01463 1163 ProSiteProfiles Protein kinase domain profile. 874 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01463 1163 SMART serkin_6 874 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01463 1163 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Tsu02g01463 1163 Gene3D Ribonuclease Inhibitor 634 806 IPR032675 -
Tsu02g01463 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Tsu02g01463 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 295 382 - -
Tsu02g01463 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 370 1159 - -
Tsu02g01463 1163 SUPERFAMILY RNI-like 308 619 - -
Tsu02g01463 1163 Gene3D Phosphorylase Kinase; domain 1 835 952 - -
Tsu02g01463 1163 PRINTS Leucine-rich repeat signature 727 740 - -
Tsu02g01463 1163 PRINTS Leucine-rich repeat signature 607 620 - -
Tsu02g01463 1163 Gene3D Ribonuclease Inhibitor 363 479 IPR032675 -
Tsu02g01463 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 300 - -
Tsu02g01463 1163 SMART LRR_typ_2 244 268 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 100 124 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 436 460 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 703 726 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 556 580 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 340 363 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 508 532 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 364 388 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 220 243 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 292 316 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 727 750 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 148 172 IPR003591 -
Tsu02g01463 1163 SMART LRR_typ_2 604 628 IPR003591 -
Tsu02g01463 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 295 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01463 Tsu-Chr2 12787846 12791892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01463 24 1160 Receptor kinase-like Gene Family AT5G46330 54.188 0.0 1150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu02g01463 Pkinase 7.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01463 K13420 - gmx:100817960 1653.65