Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01455 ATGCAGACTCACGATTATTTTCATCCGGGAAAGGCGGTACTTCCTTTGGCAGATGAAGCCATTGGTAATTATATGAATGCTCCACATGCTTCTGCATTTGATGCAGCTTTACCTCCGGGTGTGAGGCAGATGACACCCTTTGAAAGGTTTAACTTGCAGCCCTCTGAGGTTTGCCCTAAGAATTTCATTGTCTTTGATCAAACGGATCAACAGAACAGGATTTTGTTCCATCCTGCGACGACCTACAAGTTTAACAGTCCTGGCTTCAACACTCATGCTACTTATACTCAAGATTTTGAAAAGGATAAAATGAATCAAATGGAAAGGGAATTGTCATCTTCTTTTGAGGAGGACTCTAAGGACATTGATGCGTTGATGAGCCTAGACTCAGATGAACTAGAAAACTATGACGACGAAGAGGTCAGCACAGCAAGGACTCATGAAAAAGATGAAAGTACATCTGATACTTGCTCCAGTTATTGGACGAAatcaaggaagaagaagaggttGTCATCATCTTCTGTACAAAACTCTTCTGGGACAAAGGGTTACTGTAACAGTGAAAAGAAACAACACCTAGAGATGAAGAGGATGGTTAAAATGTTGAGAAATATCGTGCCTGGCGGAGGCAACCAAATGGATACTGTTACCGTTTTGGACGAAGCTGTAAAATACCTCAAGACTCTCAAGGTTGAAGTGGAGCAATTCGGAATTGGACCATGA 723 0.408 MQTHDYFHPGKAVLPLADEAIGNYMNAPHASAFDAALPPGVRQMTPFERFNLQPSEVCPKNFIVFDQTDQQNRILFHPATTYKFNSPGFNTHATYTQDFEKDKMNQMERELSSSFEEDSKDIDALMSLDSDELENYDDEEVSTARTHEKDESTSDTCSSYWTKSRKKKRLSSSSVQNSSGTKGYCNSEKKQHLEMKRMVKMLRNIVPGGGNQMDTVTVLDEAVKYLKTLKVEVEQFGIGP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01455 240 MobiDBLite consensus disorder prediction 127 189 - -
Tsu02g01455 240 PANTHER TRANSCRIPTION FACTOR BHLH145 1 239 IPR037546 -
Tsu02g01455 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 229 IPR011598 GO:0046983
Tsu02g01455 240 PANTHER TRANSCRIPTION FACTOR BHLH144 1 239 - -
Tsu02g01455 240 Gene3D - 184 236 IPR036638 GO:0046983
Tsu02g01455 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 235 IPR036638 GO:0046983
Tsu02g01455 240 MobiDBLite consensus disorder prediction 139 154 - -
Tsu02g01455 240 MobiDBLite consensus disorder prediction 171 186 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01455 16 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 39.256 2.22e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01455 - - mtr:MTR_4g096660 399.438