Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01454 ATGGTGTTGTTGAACAACGACCACAACGCTTCAGCATTGATTGCTAGCAATATGGTGCCTAAACTCTCAAACTTTTGGATTTTCTCACAAGGACCTGTAAGGGATAATAACTGTATAGTTACGAGTGAACATTATTTGGCCCCAGAGATGTTAGTAAATGATAAAGTAATAGCGAAATGTGATGTTTATTTCTTTGGTATTGTTCTATTAGAAGTGAAGAACAAAATCCTCCCAAtctcaaaaaatttcatttgcGCATTTTCATCTCAATTCTCAACAACACAACAAACCCTTCTTCTCTCTGATCCATCaccaatttcaattttcaatttccaATTTCAAATTTCCTTTCACATCTTCTTCACAATTCTCAGGTCAGAGTTTTGGCTGAGGTGA 396 0.3283 MVLLNNDHNASALIASNMVPKLSNFWIFSQGPVRDNNCIVTSEHYLAPEMLVNDKVIAKCDVYFFGIVLLEVKNKILPISKNFICAFSSQFSTTQQTLLLSDPSPISIFNFQFQISFHIFFTILRSEFWLR 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01454 131 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01454 131 Gene3D Transferase(Phosphotransferase) domain 1 5 111 - -
Tsu02g01454 131 SUPERFAMILY Protein kinase-like (PK-like) 13 82 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01454 Tsu-Chr2 12704029 12709141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01454 13 95 Receptor kinase-like Gene Family AT5G49660 30.108 3.46e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu02g01454 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01454 - - csat:104745803 55.0694