Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g01420 | ATGGCGCCGAGCATTCAACTAACTTCCGCCGGCGCCGGCAACGACTCCGACTCCGGCGACCTTGAAGATGTCCGTCTATTAGATTCCTACGATAAACGCGATGTTGAAGACGGAACCAAACGGATTCAGGTTAGAATCACCGGTATGACGTGTGCGGCGTGTTCTAACTCCGTTGAAGCCGCTCTTAAGTCCGTCGACGGCGTAATTGAAGCCTCCGTCGCTTTACTTCAGAATAAAGCCGACGTCGTTTTCAATAAAAACCTCGTCAAgGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACAGGGTTCAGTTGGACCGAAACCGGTTGGTGATAGTACGGTGGTTGGACAGTTTACGATTGGCGGTATGACGTGTGCGGCGTGTGTGAATTCCGTTGAGGGAATTTTAAAGAATATAACCGGAGTGAAAAAGGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAATTTGATCCAAAAGTGATTAGTAAAGAAGAAATTGTTGATGCAATTGAAGATGCTGGTTTTGAAGCTTCTTTTGTGCAGAGTACTAGTCAAGATGAGATTGTTTTAGgtgttgttggtgttgttgatgTTCAGGTTTTGGAGAGTATGTTAAGTGGTTTTAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTgaacttaatgttgtttttgatCCTCAAGTTCTTAGTTCTAGATCATTGTTTGATGGGATTTGTGCAGTTAGTAATGGCATGTTTGAGTTGCACGTTAGAAGTCCTTATGCTAGAATGGCTTCTAAAGATGGATCAGATAGTGAAAATATGTTTCGACTTTTTACTTCCAGCTTGTTTCTTAGTattcctctctttttcatgggAGTAATATGTCCTCATATTCCATTCATATACTCTTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATCCAATTTGTGATTGGAAAGCGCTTCTACGTAGCAGCTATCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACAGCATCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGCAAATATTTGGAATGTCTTGCCAAAGGAAAGACATCTGATGCCATTAAGAAGTTAGTAGAACTCACTCCTGCAACAGCTCTATTGGTTGTTAAAGACAAAGATGGTAAATCTattaaagaaagagaaatagatTCCCTGCTTATTCAACCTGGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCCGCTGATGGTATTGTTAGCTGGGGCTCAAGTTACGTGAATGAGAGTATGGTGACTGGTGAAGCTATACCTGTTTTGAAGGAGATCAATGCATCTGTTATTGGAGGTACAATCAATTTCCATGGCGTCCTTCATATTCAAGCCACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAATTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAAGTATTCTGGCTGTGCTCTTTGATGGTTTTTGTGCTCTGTAA | 1683 | 0.3945 | MAPSIQLTSAGAGNDSDSGDLEDVRLLDSYDKRDVEDGTKRIQVRITGMTCAACSNSVEAALKSVDGVIEASVALLQNKADVVFNKNLVKDEDIKNAIEDAGFEAEILHEQGSVGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILKNITGVKKAVVALATSLGEVEFDPKVISKEEIVDAIEDAGFEASFVQSTSQDEIVLGVVGVVDVQVLESMLSGFKGVRQFRFDPLLSELNVVFDPQVLSSRSLFDGICAVSNGMFELHVRSPYARMASKDGSDSENMFRLFTSSLFLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFVIGKRFYVAAIRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGKSIKEREIDSLLIQPGDTLKVLPGTKIPADGIVSWGSSYVNESMVTGEAIPVLKEINASVIGGTINFHGVLHIQATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVSILAVLFDGFCAL | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g01420 | 560 | ProSitePatterns | Heavy-metal-associated domain. | 130 | 159 | IPR017969 | GO:0046872 | |
Tsu02g01420 | 560 | PANTHER | HEAVY METAL P-TYPE ATPASE | 4 | 550 | - | - | |
Tsu02g01420 | 560 | PANTHER | ATP7, ISOFORM B | 4 | 550 | - | - | |
Tsu02g01420 | 560 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Tsu02g01420 | 560 | Pfam | Heavy-metal-associated domain | 44 | 104 | IPR006121 | GO:0046872 | |
Tsu02g01420 | 560 | Pfam | Heavy-metal-associated domain | 128 | 188 | IPR006121 | GO:0046872 | |
Tsu02g01420 | 560 | SUPERFAMILY | Calcium ATPase, transduction domain A | 444 | 530 | IPR008250 | - | |
Tsu02g01420 | 560 | ProSiteProfiles | Heavy-metal-associated domain profile. | 41 | 107 | IPR006121 | GO:0046872 | |
Tsu02g01420 | 560 | SUPERFAMILY | HMA, heavy metal-associated domain | 121 | 194 | IPR036163 | GO:0046872 | |
Tsu02g01420 | 560 | PRINTS | Copper-transporting ATPase 1 signature | 67 | 90 | - | - | |
Tsu02g01420 | 560 | PRINTS | Copper-transporting ATPase 1 signature | 96 | 116 | - | - | |
Tsu02g01420 | 560 | PRINTS | Copper-transporting ATPase 1 signature | 41 | 66 | - | - | |
Tsu02g01420 | 560 | Gene3D | - | 39 | 111 | - | - | |
Tsu02g01420 | 560 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tsu02g01420 | 560 | CDD | HMA | 43 | 106 | IPR006121 | GO:0046872 | |
Tsu02g01420 | 560 | ProSitePatterns | Heavy-metal-associated domain. | 46 | 76 | IPR017969 | GO:0046872 | |
Tsu02g01420 | 560 | TIGRFAM | TIGR00003: copper ion binding protein | 127 | 189 | IPR006122 | GO:0005507 | |
Tsu02g01420 | 560 | TIGRFAM | TIGR00003: copper ion binding protein | 42 | 105 | IPR006122 | GO:0005507 | |
Tsu02g01420 | 560 | Gene3D | - | 412 | 534 | - | - | |
Tsu02g01420 | 560 | Gene3D | - | 126 | 191 | - | - | |
Tsu02g01420 | 560 | SUPERFAMILY | HMA, heavy metal-associated domain | 36 | 110 | IPR036163 | GO:0046872 | |
Tsu02g01420 | 560 | CDD | HMA | 127 | 190 | IPR006121 | GO:0046872 | |
Tsu02g01420 | 560 | Pfam | E1-E2 ATPase | 425 | 552 | - | - | |
Tsu02g01420 | 560 | ProSiteProfiles | Heavy-metal-associated domain profile. | 125 | 191 | IPR006121 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g01420 | Tsu-Chr2 | 12364728 | 12370864 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g01420 | 1 | 548 | Primary Pumps ATPases | AT5G44790 | 69.542 | 0.0 | 778 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g01420 | K17686 | - | gmx:100798164 | 866.685 |