Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01417 ATGACAACCACTACAATACCTAGTGTTGGCATGGAATTTGATAGTGTAGATGCAGCTTGGCAATTTTGGGTTGAGTATGGTAAAAAGTCTGGTTTTGGAGTTAGACAACAATAttcaaacaaaagaaagaaagacaACTCAATTAGATCATGCAGGTTTGTTTGTTGCAAGGAAGGTCATCGGATGCCTGATAAGAGATCTTATCTAGTTAAGAATCCCAGAGCTGAAACAAGAACCGATTGCAGTGCAAGAATTTCACTTAGTGCAAAGAATGGAAAGTTTGTAATCCATGAATTTGTGCAGGAACATAACCACCCTTTACAACTTCCACAAACAACTCACATGCTAGCATCACACCGTAAAATATCTGAAGCTCAAGCATATGAGATTGAAATGGCAGAGGACTCTGGATTGAGGCAAAAGGCTTCATTTCAACTTATGAGTGCACAAGCAGGTGACATAACTAATCTTGGATACACACGGTTGGATGCTAAAAACTATCTTCAAGTGAAGAGAAAACATAGCATGACTTATGGGGAAGTTGGTAGTCTTATGAAGTATTTTCAACATCAATTATTGGAGAATCCTTCATTTTTTCATGCACATCAGATGGATTGCgatgaaaaaatcacaaatgtATTTTGGGCTAACGCTAAAATGGTTTTAGATTATGGATCTTTTGGTGAGGTGGTTTCTTTGGACACAACATATTGCACCAATGGTGCTAATAGACCGTTAGCCATGTTTTCAGGCTTAAACCATTATAGAGGCACTGTCATTTTTGGGGCTGCACTCTTATATGATGAAATAGCTGAATCTTTCAAATGGTTATTTGAAGTATTTCTTGAAGCACATGGAAATAAAAAACCCCAAACCATGTTCACAGATCAAGACCCAGCAATGGCTAAAGCACTTGTTGAAGTGATGTCAGAGACTCAACACGGGTTATGTACATGA 957 0.3678 MTTTTIPSVGMEFDSVDAAWQFWVEYGKKSGFGVRQQYSNKRKKDNSIRSCRFVCCKEGHRMPDKRSYLVKNPRAETRTDCSARISLSAKNGKFVIHEFVQEHNHPLQLPQTTHMLASHRKISEAQAYEIEMAEDSGLRQKASFQLMSAQAGDITNLGYTRLDAKNYLQVKRKHSMTYGEVGSLMKYFQHQLLENPSFFHAHQMDCDEKITNVFWANAKMVLDYGSFGEVVSLDTTYCTNGANRPLAMFSGLNHYRGTVIFGAALLYDEIAESFKWLFEVFLEAHGNKKPQTMFTDQDPAMAKALVEVMSETQHGLCT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01417 318 Pfam FAR1 DNA-binding domain 21 108 IPR004330 -
Tsu02g01417 318 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 317 IPR031052 GO:0006355
Tsu02g01417 318 PANTHER OS03G0181600 PROTEIN 4 317 - -
Tsu02g01417 318 Pfam MULE transposase domain 230 317 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01417 Tsu-Chr2 12347653 12348609 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g01417 MULE 1.9e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01417 - - cam:101505629 461.455