Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01406 ATGAGAGTACTTGTTGCGTACTCTAGTGGTCCAATTCTCAAAATTATACCTCTTCAATGTAAGCTAGCTGACCATAACAAAAGTCCAGTCGGCGGAGCTGCTTTTATGTTGAAACCGTCATCAGTTCCAAACTTGCATCCAAATTTCAACAATTGTCAAAATCCATTTTATaaccaatttcctcaaaacatacctaattttgGTGCACCTGAATTTCCGGAATTTTCAACACAACTAACAATTGCTAATAAAGTCACTCAAAATTTAGAGGACTCAACTCCTAAGAGCAAGAAACACCCGCAACCAACATGGAACACTGAACAAAATTTGGTGTTACTTAGTGGGTGGATTAAATTTTCAACTAGCAGTGTTGTTGGGAGAAACCAAAAACATGAAATGTATTGGGGTAATATTGCTGAGTATTGTAATGAGCATTGCAAATTCGATCCTCCGCGTGATGATGTTGCATGCCGAAACCGCTTTAATTATATGAACAAATTACTGGGTAAATGGATTGACACTTATGATGGCGCTAAGCGTTTGCAAGGAAGTGGCTGGTCGGAGAATGACATTTTATCAAAAGCACAGGAAATATACGCATGCGGGAAGATTTTGATCCATCACAATGGATCCATCAACCGAAAATATGTCAATAGAGATCATACAGCTGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGACGATGCAATGTTCCGTCGTCGGTACCGCATGCAAAAACATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGCTGATGCTGCCAAGAAAGAAGGTATATCACCTTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCCCACGGTATGACAGCAGATGCGGACGATGAGaacatcaaaataggagGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGTCAATTTACTAAGGGGGATAAGGGAACCATCACAGTTATTCTTGAAGCAGTTGCATCTCATGATCTATGGATCTGGCATGCCTTTTTTGGATGTCCGGGAACGTTGAACGACATAAACGTTCTAGACCGTTCACCTGTTTTTGATGACGTGGAACAGGGAAAGACTCCAAGTGTGAATTTCTATGTGAATCAATGTCCCTATGATATGACATACTATCTAGCTGATGGTATCTACCCTTCTTATCAAACTTTCGTCAAATCAATTAGATTTCCTCAAAGTGAACCGGATAAGTTATTTGCAAAATATCAGGAGGGATGTCGGAAGGACATCGAACATGCATTTGGAGTGCTTCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCCGACCTGAGTATCATCATGAGGTCTTGcatcatattacataatatgattgttgaggATGAACGAGATTCATATGCTCAACGTTGGACCGATTTTGAGCAGTCTGAGGAAAGTGGATCCNGAAGATGA 1524 0.3937 MRVLVAYSSGPILKIIPLQCKLADHNKSPVGGAAFMLKPSSVPNLHPNFNNCQNPFYNQFPQNIPNFGAPEFPEFSTQLTIANKVTQNLEDSTPKSKKHPQPTWNTEQNLVLLSGWIKFSTSSVVGRNQKHEMYWGNIAEYCNEHCKFDPPRDDVACRNRFNYMNKLLGKWIDTYDGAKRLQGSGWSENDILSKAQEIYACGKILIHHNGSINRKYVNRDHTAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQRADAAKKEGISPLAKCTTAMRMLAHGMTADADDENIKIGGMIGSIDCMHWEWKNCPKAWEGQFTKGDKGTITVILEAVASHDLWIWHAFFGCPGTLNDINVLDRSPVFDDVEQGKTPSVNFYVNQCPYDMTYYLADGIYPSYQTFVKSIRFPQSEPDKLFAKYQEGCRKDIEHAFGVLQARFKIIREPARLWDIADLSIIMRSCIILHNMIVEDERDSYAQRWTDFEQSEESGSXR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01406 507 PANTHER UNCHARACTERIZED 310 494 IPR045249 -
Tsu02g01406 507 Pfam Plant transposon protein 309 489 IPR006912 -
Tsu02g01406 507 PANTHER OS06G0597250 PROTEIN 211 302 - -
Tsu02g01406 507 PANTHER UNCHARACTERIZED 211 302 IPR045249 -
Tsu02g01406 507 PANTHER OS06G0597250 PROTEIN 310 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01406 Tsu-Chr2 12277283 12280192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01406 89 199 Glutathione S-transferase Gene Family AT5G41240 26.087 7.49e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01406 - - boe:106294396 644.81