Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01402 ATGGCACCTTTGTTATATTACTCACTCCTTTCCCTTACATTCATTTTAACCTTGAAACTTTCactccaaaaaataaattcaaaaaaccTTCCTCCAAGTCCATTAATAACTCTTCCCATAATAGGAAACCTTCACAACATAAACCTCCCACTTCACCGTTCACTTCAAAACCTTTCACAAAAATACGGCGACATCTTCACCCTATGGTTTGGTTCACGTCGTGTTGTCGTCATCTCCTCCCAAGCCCTATTTCAACAATGTTTAACCAAACACGACGTTGTTTTATCAAACCGACCCCGCTTTCTCACCGGAAAACATTTCTTCTACAATTACACTAGCTTAGACTCTGTCCCATATGGCGACCACTCGCGTAATCTACGCCGAGTCATCACCGTTGATGTCCTCTCAACACAACGTCTCAACTCCTTCATAGAAACGCGAAGAAAAGAGGCGTTGAAGCTTATAACAAAACTAGCTAAGGACACGTGTGAGGAATTCACACGTGTCGAGTTGAGGACGAGGCTAACAAATATGACATTTGACATTATGACGAGAATGGTTGCCGGTGAAGCTACGGAAGGGAAGAAgtttaaaaatttgataaatgAAATGATGCCGTTGCTTGGGGCAAGTAATAAGGGAGATTTTGTGCCTTTAATTaggttgtttgattttaatggCGTGGTTAAGAGGATGAAGGATATTGGCAAGAGAGGTGATTCTTTTGTGCAAGGAATTGTTGATGAGATTAGAAGTGGGAAGCATGGTCATGGTAATAACATGGTACAACATCTTTTGACTCTACAAAAATCTCAACCTGAGAATTATTCTGATGTGATTATCAAAGGACTTATTCAGGGTATGTTTCTTGGTGGAACTGACACATCAGCTGTGACTCTAGAGTGGGCAATATCCGCTTTATTAAATAACCCACATGTATTGAAGAGAGCAAAAGATGAAATAGACACTCAAATAGGATATGATCGTTTGGTAGATGAGTCAGACATTCCAAATCTTCCATacattcaaaatattatctACGAGACGCTTCGATTATACTCTCCTGCTCCGTTACTATTGCCTCGTTATACTTCAGACAAGTGCAATTTTGAAGGATTTACTATTCCAAGTGACACCATAGTGTTGATTAATGCATGGGCCATTCAAAGAGATCCCAAAATTTGGAGTGATCCTTCATGTTTTAAGCCAGAGAGATTTGAAAAAGAAGGAGAAGCAAAAAAGGTAATTGCATTTGGTTTTGGAAGAAGGATTTGTCCAGGAATGGGTTTGGCATATCGTACAATGGGCTTGACTTTGGGATTATTGATTCAATGCTTTGAATGGAAACGAATAACTCATGAAGAAGTGGATATGACTGAATGTAAAACAGGACTCGTGATGGAAAAGCTTAATCCATTAGAAACAATGTGTAAGGCAAGACCAATCATCAAGAAAGTTATCCAAGAATTAAATATCTAG 1479 0.3759 MAPLLYYSLLSLTFILTLKLSLQKINSKNLPPSPLITLPIIGNLHNINLPLHRSLQNLSQKYGDIFTLWFGSRRVVVISSQALFQQCLTKHDVVLSNRPRFLTGKHFFYNYTSLDSVPYGDHSRNLRRVITVDVLSTQRLNSFIETRRKEALKLITKLAKDTCEEFTRVELRTRLTNMTFDIMTRMVAGEATEGKKFKNLINEMMPLLGASNKGDFVPLIRLFDFNGVVKRMKDIGKRGDSFVQGIVDEIRSGKHGHGNNMVQHLLTLQKSQPENYSDVIIKGLIQGMFLGGTDTSAVTLEWAISALLNNPHVLKRAKDEIDTQIGYDRLVDESDIPNLPYIQNIIYETLRLYSPAPLLLPRYTSDKCNFEGFTIPSDTIVLINAWAIQRDPKIWSDPSCFKPERFEKEGEAKKVIAFGFGRRICPGMGLAYRTMGLTLGLLIQCFEWKRITHEEVDMTECKTGLVMEKLNPLETMCKARPIIKKVIQELNI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01402 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Tsu02g01402 492 Pfam Cytochrome P450 31 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 SUPERFAMILY Cytochrome P450 31 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 485 - -
Tsu02g01402 492 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 485 - -
Tsu02g01402 492 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 Gene3D Cytochrome P450 23 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01402 492 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01402 Tsu-Chr2 12214938 12217612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01402 10 489 Cytochrome P450 AT4G37340 50.407 1.96e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01402 K13260 K22932 gmx:100784120 630.943