Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01400 ATGTCATCAAACAAAGATTTTCCAGAATTGAATACACTGGATAATGATGGTGTAAGGGTAATTGTTCGAAAATGCCGAGATCCAGGCACTGAAAATGGCGCAATTCTCACCGCGACTACCTCCTTTTGGCTTTCTTGCACACCTCAGcatgctttcaattttttgaaagaCAATAGTAGAAGATTTCAGTGGGATATTCTATGTGAAGGCCATCATCAAGTGGAAGAACTTCACCGTATCACATATGGAACAAATCCTGGAAATTTTACTTCCATTATTAggACATTGAATCCTGAGGATAAAGATATGAGGATACTACAAGAGTGTTATGCTAATGGTATGGAATCAGGGCTGGGGGAAGAAGCTGGCGTCTCGTGTGAAGGTTCAGTTGTAACTGTGGCGTACCAATTGCTGATCGGTACACCGGCTGAAATTGATAATCCAGATCTGGATGCAGTGAAGAAAATGAACAAATTTGTTACTTCAACGGTGAACAATATCAGGCATGCTTTGAAGTGTTCGTCTTTTTAA 531 0.3879 MSSNKDFPELNTLDNDGVRVIVRKCRDPGTENGAILTATTSFWLSCTPQHAFNFLKDNSRRFQWDILCEGHHQVEELHRITYGTNPGNFTSIIRTLNPEDKDMRILQECYANGMESGLGEEAGVSCEGSVVTVAYQLLIGTPAEIDNPDLDAVKKMNKFVTSTVNNIRHALKCSSF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01400 176 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 8 172 - -
Tsu02g01400 176 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 8 172 IPR042160 -
Tsu02g01400 176 SUPERFAMILY Bet v1-like 14 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01400 Tsu-Chr2 12190443 12191346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01400 13 175 Homeobox Transcription Factor Family AT1G17920 32.663 5.71e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01400 K09338 - cit:102623619 112.464