Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01392 ATGAGTTCAGTGGCACCATATTCAGTTGGAACTTGTCTCACCTCATTGCACCTCCAAAAACGTAGTAACCATTCTTCTACAACATGTTCTTCTGTTCAAGTTCAACAGCAACAACCGCAAGTTCTTGTACAAAAGGAGAATCAATTTAAGAGAAGAGAAGCAATAGGCCTCTCCTTGAGTTTTGGTCTTCTTCATTCTTTCTTGGAACCAATAATACCCACTGCAACAGCAGCAGAAACAGTTCCGTGTGAATTAACAGTAGCTCCTTCAGGTCTTTCCTATTGTGATAAAGTTGTTGGCGCTGGTTCTCAAGCTGTTAAAGGACAACTTATTAAGGCACACTATGTTGGGAGACTGGAGAATGGAAAAGTGTTTGATAGCAGTTATGATCGTGGCAAGCCACTTACGTTTCGCGTTGGTGTTGGAGAGGTTATCAAAGGATGGGACGAAGGCATTTTAGGAGGTGATGGAATTCCTCCTATGCTTACAGGAGGTAAACGTACGTTGAAGCTTCCTCCGGAACTTGGATATGGTTCAAGAGGGGCTGGTTGTAGAGGAGGTTCATGTGTCATTCCTCCGGATTCGGTACTCTTATTCGATGTGGAGTTTGTTAGCAAAGCATGA 624 0.4327 MSSVAPYSVGTCLTSLHLQKRSNHSSTTCSSVQVQQQQPQVLVQKENQFKRREAIGLSLSFGLLHSFLEPIIPTATAAETVPCELTVAPSGLSYCDKVVGAGSQAVKGQLIKAHYVGRLENGKVFDSSYDRGKPLTFRVGVGEVIKGWDEGILGGDGIPPMLTGGKRTLKLPPELGYGSRGAGCRGGSCVIPPDSVLLFDVEFVSKA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01392 207 Gene3D - 79 207 IPR046357 GO:0003755
Tsu02g01392 207 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 20 206 - -
Tsu02g01392 207 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 108 207 IPR001179 GO:0003755
Tsu02g01392 207 PANTHER - 20 206 IPR044609 GO:0000413|GO:0003755|GO:0061077
Tsu02g01392 207 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 104 203 IPR001179 GO:0003755
Tsu02g01392 207 SUPERFAMILY FKBP-like 85 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01392 Tsu-Chr2 12099968 12103583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01392 72 205 Calmodulin-binding Proteins AT5G48570 35.417 7.68e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01392 K01802 - gmx:100778390 254.218