Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01314 ATGGCAAGACCACAACAACGTTATCGAGGTGTTCGTCAAAGACATTGGGGTTCTTGGGTCTCTGAAATTCGTCACCCTTTATTgaAGACAAGAATTTGGTTGGGAACATTTGAAACAGCAGAGGATGCAGCAAGAGCATATGATGAAGCAGCAAGATTAATGTGTGGACCAAAAGCACGTACCAATTTCCCATACAATCCAAATGGACCACAATCATCTTCATCTAAGCTTCTTTCAGCTACTTTAACTGCAAAGTTAAATAAGTGTCACATGgcttctctttctcttcaaatGTCCAAACAACAATCACCACCACAAAAAGAGCCACAACATGTTTCAACACAAAGTTTTAATTCTtccattaataataataacacttTTGTTTATGGTAATGACATTGGTGGAACAAGTGGTGAAACTAGTTTAATTAGATGGCTTGATGAAGGAAATAGTTTTGTTGGTTTTGAAGGTCAACAAGTTGAAGTTTCTAATCAACAATTTCAACCTGTTCTTGAAGATGATCATATTGAACAAATGATTCAAGAGTTGCTTCATTCTGGTTGTTCAATTGAGATTTGTTCCGTCGGTTCATCTTAG 597 0.3467 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNGPQSSSSKLLSATLTAKLNKCHMASLSLQMSKQQSPPQKEPQHVSTQSFNSSINNNNTFVYGNDIGGTSGETSLIRWLDEGNSFVGFEGQQVEVSNQQFQPVLEDDHIEQMIQELLHSGCSIEICSVGSS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01314 198 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 194 - -
Tsu02g01314 198 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Tsu02g01314 198 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Tsu02g01314 198 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Tsu02g01314 198 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Tsu02g01314 198 PANTHER ETHYLENE RESPONSE FACTOR 1 194 - -
Tsu02g01314 198 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Tsu02g01314 198 MobiDBLite consensus disorder prediction 96 119 - -
Tsu02g01314 198 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Tsu02g01314 198 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Tsu02g01314 198 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01314 Tsu-Chr2 11461110 11462316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01314 1 195 AP2-EREBP Transcription Factor Family AT5G25190 61.538 3.64e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu02g01314 AP2 8.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01314 - - gmx:100777851 247.669