Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01308 ATGGCAACAAATGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTGTAGCATCATGGCTTgttaagcttcttctttccaaaGGTTACTCTGTCCATGGAACTGTCAGACAACATGGTAGTAAGAAATATGAACACTTGCTGAAACTCGAGAGAGCTTCTGAGAACCTTACACTTTTCGAAGCAGATATCTTAAATTATGAATCTGTTTACAAAGCAATTGTCGGATGCAGTGCCGTTTTCCATGTTGCTAGTCCTGTACCTTCAACAGTTGTACTAAATCCTGAGGTGGAAGTGATTGAGCCTGCGGTGAAGGGAACATCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAACGTGTCGTCTTTCTATCATCTGCAGCTGCTGTTGCTATCAATCCTAATTTCCCGGAATATAAAGTGATTGACGAGTCTTGTTGGTCTGACAAAGACTACTGCAAAAAAACTAAGAACTGGTATTATTATTCCAAGACAGAAGCAGAAGAGCAGGCCCTGAATTTCGCGAAAAGAATTGGACTTGATTTTGTAAGCATTTGTCCTCCCCTTGTTTTGGGGCCAATTTTACAGTCAACCACTAATTCAAGTAGCTTAGTTCTCATCAAACTTTTAAAAGGCTATGATTCATTGAAGAATGAGCATCGTTGGATAGTTGACGTACGAGACGTAGTTGATGCAATACTTTTGGCATATGAGAATCACAAGGCAGAAGGGAGATACATATGTTTTTCACACACTGTCGCAAAACGAGATTTGGTGGAGAAATTGAAGAGTCTATTTCCAAACTACAAGTACCCTACAAACTATACTGAGGTGGATGATAACAGAATGCTGAGCTCAAAGAAACTGCAAAGTTTAGGTTGGAAATTCAGGCCATTGGAGGAAACACTCATTGATTCTGTTAAAAGCTATAAGGAAGCTGGACTACTctaa 963 0.3936 MATNGGANKKVCVTGAGGFVASWLVKLLLSKGYSVHGTVRQHGSKKYEHLLKLERASENLTLFEADILNYESVYKAIVGCSAVFHVASPVPSTVVLNPEVEVIEPAVKGTSNVLEASLKAKVERVVFLSSAAAVAINPNFPEYKVIDESCWSDKDYCKKTKNWYYYSKTEAEEQALNFAKRIGLDFVSICPPLVLGPILQSTTNSSSLVLIKLLKGYDSLKNEHRWIVDVRDVVDAILLAYENHKAEGRYICFSHTVAKRDLVEKLKSLFPNYKYPTNYTEVDDNRMLSSKKLQSLGWKFRPLEETLIDSVKSYKEAGLL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01308 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 319 - -
Tsu02g01308 320 CDD FR_SDR_e 11 298 - -
Tsu02g01308 320 Gene3D - 2 320 - -
Tsu02g01308 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Tsu02g01308 320 Pfam NAD dependent epimerase/dehydratase family 11 246 IPR001509 -
Tsu02g01308 320 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01308 Tsu-Chr2 11415176 11419040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01308 10 320 Monolignol Biosynthesis Gene Families AT2G33590 57.827 3.17e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01308 - - mtr:MTR_4g009040 523.472