Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01300 ATGGGCCTTGTTAGTGACCCACGACATTTAAAAGTTGATGATGAAGTTTCTCCACACGCCACCAAACTAGTCTCCTCACAACCTCAGCTACCACCCTTTCTTCACTCTCATATTTACCACAAATTAATGGAGGAGTCGGGAGAAAATTGGCCTTCTGAGTCTGATTTGGTAATTGGTGGTGATGATGTAATTTTTGAAGATGGAGATCAATCTGAATCTGTGTGTGGTGATAGAGAAATTAAGGAGAAATTGATGGCACTTTCGGCCACCATAGGCTTGAACAAGATGGACGACACTACAATCCTAGACAAAGCTAAAATCTATGTGGAAAACCTTCAAGAACTTGTGAAAGAGCTAGAACAAGAAGATGGATCCAACATCAAAAGGACTAAAATTGTGAACTCAAATGAATACAATTGTGGAACAAGTGAGAATCTTCCCGAGGTCCAAGCAAAAGTATTACAAAAGGAAGTTCTTCTCATAATCCATTGTGAGAAACAAAATGGTGTCATACTCAAAATATTGACACACCTTGAAAATCTTCATCTTTCAATAGTTAACAGTAGTGTCTTGCGATTTGGAAAATCCAACCTTGACATCACCATTGTTGCGCAGATGGGTGATGGATACAACATTACAGTGGATGAATTAGTGAAAACCCTGAGATTAGTGATCTTGACACAATAA 687 0.3872 MGLVSDPRHLKVDDEVSPHATKLVSSQPQLPPFLHSHIYHKLMEESGENWPSESDLVIGGDDVIFEDGDQSESVCGDREIKEKLMALSATIGLNKMDDTTILDKAKIYVENLQELVKELEQEDGSNIKRTKIVNSNEYNCGTSENLPEVQAKVLQKEVLLIIHCEKQNGVILKILTHLENLHLSIVNSSVLRFGKSNLDITIVAQMGDGYNITVDELVKTLRLVILTQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01300 228 PANTHER BHLH TRANSCRIPTION FACTOR 78 228 - -
Tsu02g01300 228 Coils Coil 102 122 - -
Tsu02g01300 228 PANTHER PROTEIN, PUTATIVE-RELATED 78 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01300 Tsu-Chr2 11260760 11268785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01300 74 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.503 3.90e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01300 - - aip:107616596 196.052