Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01292 ATGTCAGAGGTGTGGCTTATTCTGAAGAGATCATTACATTGCAAACCTCAATCATCAGAGGTTCATGATCCAAAGGCAAATAGgcaccataaaataaaaaacaacaaagacaAAAGTGTCAAAAACGGTACCATGCTTAACCATGTTATTCATGAAATTGTTTTTGATAGCAAAAGTGGTGAGTTTAAATGTTATCCTTCTTTTCAAAACATTGAAGTTCCTCCTCCTTATAGATCAACTAAGGCAACCAagacttcaacaaaatcacgtTGTGTTGATTGTGATGGatgttttgttttctcaaaGCCAAAGGTAAAAATTGTGAAAGATCCAAATGATTTGTTTTCGGGTGTAACTTTTCCTCTTGCCACCATTGAAGAACATGATATTTCTGAGCATTCAGTAATCAATCTTCATAGACAAGATTCATCTTGGCAAATTATCAAAAGAATATGCAAAGTTAACAATGATAATAGTGAAAGCAAAACAATATTACAAATTGAATATGTCTTGAAAGTCCAAAACATGCCGGAAACATTTGCAAGCTTTGAGGAATTTAGAGAAATTACAAAGATTAATGCGGAAAAGCTACAAATTAAGCATCCTCGGATTTTAGTTGATGGAAATGAGATGTTAAGGTTTCATGGTACAACAATTGCATGTTCCCTTGGTATAAATGGTTCTTCTAATCCATGCACTTTAGACCAATGTGGTTTATGCCAAATTTTGAGGCTTGGTTTCTCTGCCAACCACAAATTTGAGGATACTATTGGTGTTTTCACAGCTTCTACATGTGGAAAAGCTATTGGTTCTATTAAGTCTTTCAATAAACCATTTATGAGAAAATGTGTTATTGTGTGTAGGGTGATAGCCGGGAGAATCAATAATCCTTTGCAAGAGATTCAAGAAATGAGCTATTCAGATTATGATTCTTtggttaaaaatataaattgtcaATTAGATATTGAAGAACTTATTGTTTTAAATCCTAGAGGTGTTCTCCCTTGCTTTGTGATTTGTAAACACAAGAACAAGGGTGGGCTTGGCTTCAGAGAATTAAAGGCTTTCAATGAAGCGCTTCTTGCAAAACAGGGATGGAGATGTATCACTCAACCAAACATTATGATTGCTCAAATTCTAAAAGCTAAATATTACCCTGAGAAAAGCTTTGTTGAGGCAGAGATTGAGAATAAATCTGTGAGTTACACTTGGCATAGTAGATCCAAGGCTAATTGGATATTAAAGAAAGGGGTTCTCTGGAACATTGGGAATGGAGCCAACATAAACATCTGGAATGATAACCGACTCCCTAGGCAACAAGGCGCCTTGAAATTCAACGTGGATGCTCACCTTTCTGGTGATGGCAGTTGGGGGTTAGGGTGGATTGTGAGGAGGGAGGATGGTAGTTGGGTTGGAGCTACAACCAAGGTGGTTCGTGGGATCAAGGAGGTAGCGGCAGCAGAAGCGCGTGTGTTGGAAGCCATTAAAGCTTCTTCGTTGTTTCAACATGATAGCTAA 1518 0.3557 MSEVWLILKRSLHCKPQSSEVHDPKANRHHKIKNNKDKSVKNGTMLNHVIHEIVFDSKSGEFKCYPSFQNIEVPPPYRSTKATKTSTKSRCVDCDGCFVFSKPKVKIVKDPNDLFSGVTFPLATIEEHDISEHSVINLHRQDSSWQIIKRICKVNNDNSESKTILQIEYVLKVQNMPETFASFEEFREITKINAEKLQIKHPRILVDGNEMLRFHGTTIACSLGINGSSNPCTLDQCGLCQILRLGFSANHKFEDTIGVFTASTCGKAIGSIKSFNKPFMRKCVIVCRVIAGRINNPLQEIQEMSYSDYDSLVKNINCQLDIEELIVLNPRGVLPCFVICKHKNKGGLGFRELKAFNEALLAKQGWRCITQPNIMIAQILKAKYYPEKSFVEAEIENKSVSYTWHSRSKANWILKKGVLWNIGNGANINIWNDNRLPRQQGALKFNVDAHLSGDGSWGLGWIVRREDGSWVGATTKVVRGIKEVAAAEARVLEAIKASSLFQHDS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01292 505 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 340 - -
Tsu02g01292 505 MobiDBLite consensus disorder prediction 17 39 - -
Tsu02g01292 505 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 340 - -
Tsu02g01292 505 Gene3D - 126 345 - -
Tsu02g01292 505 SUPERFAMILY ADP-ribosylation 135 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01292 Tsu-Chr2 11128609 11132691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01292 122 341 C2H2 Transcription Factor Family AT5G54630 48.261 8.32e-63 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01292 - - cam:105851073 424.476