Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01269 ATGAGGAAGAATTTGAACTTGGAGCTTCGTCTTTTCCCTCTCTCAAATTCTGATCTTTGTTCCACaatgaaagaagaagaagcagaaaGCAGTGATAGTCAACTACAAGATCACCAACACCGGCCGTTGACCATTGTCTATGATGGCAGGGTTTGCGTTCATGATGCCACAGAAATTCAGGCCAGATCAATTTTAATGTTTGCAAATAAAGAAATGGAGGAAAGAGTGAGAACACCAAGTGGAACATTATCAGAGCCATCTTCACCATCAGTATTTAACTTATATAGCCCTGCCACTTCTCCTTCCATGAAGAAATCATTGCAAAGGTTTCTCCAAAAGAGGAAGAATCGGATCCAAGAAGCATCCCCTTACCATCGATCTCAAGATAAATGA 393 0.3893 MRKNLNLELRLFPLSNSDLCSTMKEEEAESSDSQLQDHQHRPLTIVYDGRVCVHDATEIQARSILMFANKEMEERVRTPSGTLSEPSSPSVFNLYSPATSPSMKKSLQRFLQKRKNRIQEASPYHRSQDK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01269 130 Pfam Jas motif 98 124 IPR018467 -
Tsu02g01269 130 ProSiteProfiles Tify domain profile. 36 70 IPR010399 -
Tsu02g01269 130 PANTHER - 1 125 - -
Tsu02g01269 130 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 125 IPR040390 -
Tsu02g01269 130 MobiDBLite consensus disorder prediction 73 130 - -
Tsu02g01269 130 MobiDBLite consensus disorder prediction 80 107 - -
Tsu02g01269 130 MobiDBLite consensus disorder prediction 113 130 - -
Tsu02g01269 130 Pfam tify domain 41 69 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01269 Tsu-Chr2 10834664 10836713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01269 1 125 Tify Gene Family AT1G30135 42.188 9.88e-23 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tsu02g01269 tify 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01269 - - gmx:100305565 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01269 02 10834664 10836713 Tsu02g01269 02 10834664 10836713 ECH