Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01262 ATGGAGGAGGAGGATGAGATTCAAGCACAACATAAATTCCCTAGAGTTggaaatgaagaaaataatgGAAGAAGAGATGTTAATAACAGGTTCAATAGTTGGCATcattcttcaagaattataaGGGTTTCAAGAGCTTCTGGTGGTAAAGATAGGCATAGTAAAGTTATGACTTCAAAAGGTTTAAGAGATAGAAGAGTTAGGCTTTCTGTTACAACAGCTATTCAATTCTATGATCTTCAAGATAGACTTGGTTATGATCAACCTAGTAAAGCTGTTGAATGGTTGATTAAATCAGCTTCTGATGCTATTTCTGAATTACCTTCACTTAACAACTCATTATTTACTGATACTAATAATCAATTAAGTGAACAAGGTGTTGATTCAGTTCATTCGGTTCATGATGCTGAAATGGTTGTTGAGAATGGTGGTGAAAATAATTACCATGGTCAGAATCTTTCTTTGTCTAAATCTGGTTGTAGTAGTACTTCTGAAACAAGTAAAGGTTCTGGTTTATCTCTTTCAAGATCTGATGCTCGTGTGAGCCGTGTTAAAGCTAGAGAAAGAGCTAGGGAAAGAACTgctaaagagaaagaaaaagagaatcaTCATGAGAATGTTAATAATCCTCATCATCagcatcatcaacaacatcataatGTGAATGTGAACTCTTCTATTTCTCAAACAGCTTCTTTCACTGAACTTCTTACTGGTGGAATTAACAATACAGTTGTTCCTACTACAAATAGTCCTAGAGGGTCAGTTGATGAACCTAGTTTCTTCAACAAAGCAAgacaacagcagcagcagcagcagcaatgGAGTTCTTCAGCACCAATGGATCATTACTTTAGTCCAATATTTCTAGGATCTTCATCATCAAGAACacaacatcaacatcatcatcaattaggACATTCACTTCATGATCATCAATCAATGAATATGTCTTCACCATTCAATAGTGGTGAAAACCATTCAGCAGatcagaatcagaatcagaatcaTCATCAGCATCATTTGCAGCATCAATATTCATTTTTACCTGATCATATGATGCAAAATGTGGTTACATCTTCTTCTACTCAACCAAGCGGGAACAATGATTATAATCTAAACTTCACTATATCTTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCACCGTCTCTTTTATCTCATCTTCAAAGGTTTTCAGTTTCACCTTTAGATGGACCCAACAATCTACCATTTTTCATGGGAGGAGGAGCTGCTTCTGCTTCTCATGCTTCAGCTTCACCTGCTCCTACTGCAATGGAGAGtaatcacaatcacaatcatCACCACCAGATTCATCATCATCAGTTTTCATCTGTTTTTGATGGTAGCAGCTTACAGCTCTATTCAGATCAGAAAGGGAAATCTAAAAACTGA 1428 0.3256 MEEEDEIQAQHKFPRVGNEENNGRRDVNNRFNSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNSLFTDTNNQLSEQGVDSVHSVHDAEMVVENGGENNYHGQNLSLSKSGCSSTSETSKGSGLSLSRSDARVSRVKARERARERTAKEKEKENHHENVNNPHHQHHQQHHNVNVNSSISQTASFTELLTGGINNTVVPTTNSPRGSVDEPSFFNKARQQQQQQQQWSSSAPMDHYFSPIFLGSSSSRTQHQHHHQLGHSLHDHQSMNMSSPFNSGENHSADQNQNQNHHQHHLQHQYSFLPDHMMQNVVTSSSTQPSGNNDYNLNFTISSGLAGYNRGTLQSNSPSLLSHLQRFSVSPLDGPNNLPFFMGGGAASASHASASPAPTAMESNHNHNHHHQIHHHQFSSVFDGSSLQLYSDQKGKSKN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01262 475 MobiDBLite consensus disorder prediction 244 343 - -
Tsu02g01262 475 MobiDBLite consensus disorder prediction 244 281 - -
Tsu02g01262 475 MobiDBLite consensus disorder prediction 310 343 - -
Tsu02g01262 475 MobiDBLite consensus disorder prediction 145 177 - -
Tsu02g01262 475 MobiDBLite consensus disorder prediction 422 454 - -
Tsu02g01262 475 MobiDBLite consensus disorder prediction 180 212 - -
Tsu02g01262 475 MobiDBLite consensus disorder prediction 1 31 - -
Tsu02g01262 475 Pfam TCP family transcription factor 48 200 IPR017887 -
Tsu02g01262 475 PANTHER TRANSCRIPTION FACTOR TCP24 12 474 - -
Tsu02g01262 475 MobiDBLite consensus disorder prediction 143 219 - -
Tsu02g01262 475 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Tsu02g01262 475 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 474 IPR005333 GO:0003700
Tsu02g01262 475 ProSiteProfiles R domain profile. 180 198 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01262 Tsu-Chr2 10768999 10776452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01262 26 475 TCP Transcription Factor Family AT4G18390 41.053 2.86e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu02g01262 TCP 2.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01262 - - gmx:100816799 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01262 02 10768999 10776452 Tsu02g01262 02 10768999 10776452 ECH