Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01244 ATGGCAAAGCAGATCCACGAGATCAAGGATTTTCTTCTGACGGCGCGTAGAAAGGACGCGAGATCAGTCAAAATCAAGAGAAGCAAGGATGTGGTTAAGTTCAAGGTTCGTTGCTCCAAGTATTTGTATACACTCTGTGTGTTTGATACTGACAAAGCTGATAAGTTGAAGCAATCTCTTCCTCCTGGTTTGACTGTTCAAGATCTGTAG 210 0.4286 MAKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTDKADKLKQSLPPGLTVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01244 69 Gene3D - 1 69 IPR038464 -
Tsu02g01244 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Tsu02g01244 69 Pfam Ribosomal L38e protein family 3 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Tsu02g01244 69 PANTHER - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01244 Tsu-Chr2 10585566 10587347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01244 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.304 2.30e-42 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01244 K02923 - twl:120016129 133.265