Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01235 atGGAAATGGAATTACTTTCTAGAGAAACCATCAAACCATCATCACCAACTCCTTCTCACCTTAGAATATATCCACTTTCATTTATAGACAACATTGTTTTCCGTAAGTATTTACCATTACTTTACTTttacaaccaaaacaaagatattgaccaaaatttcaaaatttcacaacTTAGAAAATCTTTATCTCAACTTCTAACCAAATACTACCCTTTTGCTGGAAGATTGAAAGATAAAATTACCATTGAATGTAATGATCATGGTGTGTCATTTTTAGTtacaaagataaaaaacaaactatCAGAGATTCTCCAAAATCCGTCAGAAAAATTGTTGAACTCGTTATTCCCCGACGAATTGCAATGGAAAGATATGGATTGGAGTGACACGTTAATAGCCATTCAAATCAATAATTTTTCATGTGGAGGAATGGCAATAAGTATTTGCATGAGTCATAAAATTGGTGATGTTGCTACCCTTTTCAACTTCATGAATGATTGGTCCATCATCAACCAAAAAttacaagaagatgaaaagggGTTATTAGCATTATTACCCTTTGATGGAGGAGCTTCTGTTTTTCCACAAAAGGATTTACCTATTTTCCCAGAACTTTTGCTTAAGAGAGAAAACAATGTGGTGTGTAAAAGGTTTGTGTTTCAACCCTCAATGATTAAGTTACTCAAGGCAATGGTGAATTCTAGTTCCATGGATTCAGCTCCTACACGCGTACAAATTGTAACGGCATGGATTTACAAATGTGCGGTTTCAATAATGGGATTAAATTTCAAGACGGCATTGTTTACCATGAGTGTGGATCTTCGCAAAAGAATGGTTCCTCCGTTGTCTGAAAAATGTGTAGGGAACATATTATGGTTCTCGTATATGTTTGCAGATAAGGAGGAAATGGAATTAAAGGATTTGGTATGTAAAATAAAAGAAGGGTTATCCGAGTGTTGCGACGTTTATCCAAAAATGTTTGGTGGGAAAGAAAAGGAACATTTTTCAATGATATCTGAGTGCTTGAAACAAGTAACGGAGCCTCCTTCTGAGAATGATAATTTGTTTACTTTTAGTAGTTGGTGTAAGTTTCCAATGTATGAAGCTGATTTTGGGTGGGGAAAACCAACATGGGTCACGACTTTCGGCTGTTCGTTGAGGAATGTAATATTTCTGATGGATACGAGAGATGGAGATGGGATCGAAGCGGTTGTAAATATGGAAGTGAATGATATGGCTAAGTTTGAGCATGATGTTGAGCTTCTTCAATATGAATCTCTTAAATCTTATCAATGTTGA 1302 0.3341 MEMELLSRETIKPSSPTPSHLRIYPLSFIDNIVFRKYLPLLYFYNQNKDIDQNFKISQLRKSLSQLLTKYYPFAGRLKDKITIECNDHGVSFLVTKIKNKLSEILQNPSEKLLNSLFPDELQWKDMDWSDTLIAIQINNFSCGGMAISICMSHKIGDVATLFNFMNDWSIINQKLQEDEKGLLALLPFDGGASVFPQKDLPIFPELLLKRENNVVCKRFVFQPSMIKLLKAMVNSSSMDSAPTRVQIVTAWIYKCAVSIMGLNFKTALFTMSVDLRKRMVPPLSEKCVGNILWFSYMFADKEEMELKDLVCKIKEGLSECCDVYPKMFGGKEKEHFSMISECLKQVTEPPSENDNLFTFSSWCKFPMYEADFGWGKPTWVTTFGCSLRNVIFLMDTRDGDGIEAVVNMEVNDMAKFEHDVELLQYESLKSYQC 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01235 433 Gene3D - 211 427 IPR023213 -
Tsu02g01235 433 Pfam Transferase family 2 422 - -
Tsu02g01235 433 Gene3D - 1 202 IPR023213 -
Tsu02g01235 433 PANTHER F21J9.9 5 430 - -
Tsu02g01235 433 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01235 Tsu-Chr2 10478481 10479815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01235 1 417 Monolignol Biosynthesis Gene Families AT5G48930 22.472 1.25e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01235 - - mtr:MTR_5g084900 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01235 02 10478481 10479815 Tsu02g01235 02 10478481 10479815 ECH