Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01234 ATGAACGATTGGGGCAAATTGAACCGTGGAGAAggagattcaaattcaaaattatcTTTGCCCTACAATTTACTTTATGCAGGAGATACCATATTTCCACAAGGGAATTTGCCAAATTTTCCGGAAGGCGAGTTTGTGATAGACAAAACAATAGTATGCAAAAGATTTGTGTTTGAAGCTTCTAAGATAAAGCTACTTAAAAACATGGTAAATTTTGATTCCCGTGAAGTGAAAAATCCCACACGTGTAGAAGTTGTCACGTCACTTATTTACAAGTGTGTGGTTTCTACATTGGGATTAAATTACAAAACGACATCGCTTCGCATGGCTGTAGATCTTCGCAAAAGAATGATTCCTCCATTGTCTGAAAAGTGTGTTGGAAACTTAGTTTGGTTCTTATTTGTTATGAACCCGGAATTACATGACTTGGTATTCAAAATTAGGCAAGGGTTGTGTGAGTTTCGTGAGGTTTATCCAAAGAAATTtggaggaaaagaaaaagacgtgtcatttatttttgaatgtttGAAACAAGTTACTACTTCAGTTTCAGAGAGTAATAATGATGATCAAAGTTTGATTCTTTATGCTAGTTGGTGTAGGTTTCCAATGTACGAAGCTGATTTTGGTTGGGGCAAACCAATATGGGTGACAACTAGTGCATGCCCGGTGAAAAATGCGATAGTTTTGATGGATACGCGAGATGGAGATGGAATTGAAGCAATTGTGAATATGAAAGAGAATGATATGATGATGTTTGAACATAATGTGGAGCTCCTTCAATATGCCTCTGTGAATCCTAGTATTGTTGGACATGATATAGCTAATGGATTCTAA 837 0.3429 MNDWGKLNRGEGDSNSKLSLPYNLLYAGDTIFPQGNLPNFPEGEFVIDKTIVCKRFVFEASKIKLLKNMVNFDSREVKNPTRVEVVTSLIYKCVVSTLGLNYKTTSLRMAVDLRKRMIPPLSEKCVGNLVWFLFVMNPELHDLVFKIRQGLCEFREVYPKKFGGKEKDVSFIFECLKQVTTSVSESNNDDQSLILYASWCRFPMYEADFGWGKPIWVTTSACPVKNAIVLMDTRDGDGIEAIVNMKENDMMMFEHNVELLQYASVNPSIVGHDIANGF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01234 278 Pfam Transferase family 1 259 - -
Tsu02g01234 278 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 270 - -
Tsu02g01234 278 Gene3D - 48 264 IPR023213 -
Tsu02g01234 278 PANTHER F21J9.9 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01234 Tsu-Chr2 10473587 10474423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01234 84 254 Monolignol Biosynthesis Gene Families AT5G48930 21.579 1.02e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01234 - - lja:Lj3g3v0730040.2 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01234 02 10473587 10474423 Tsu02g01234 02 10473587 10474423 ECH