Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01233 ATGGAAATGGTACTAGTTTCTAGAGAAACCATCAAACCTTCATCACCAACTCCTTCTCATCTTAGAATATATCCACTCTCTTTTATAGATAACATTTTTTACCGTAAATATGTGCCAGCACTTGTTTTTTACAACACAAAGGATTGTAGTAaccaaaattctaaaatttcaCAACTTCGTGAGTCCTTATCTCAAGTTCTATCTAAATACTACCCTTTTGCTGGCAAGTTAAAAGATAAAACTAGCATTGAATGTAATGATCAAGGTGTGTCATTTCTCGTCACAAaggtccaaaaaaatatatcagaGATTCTCCAAAATCCGACAGAAGAATTGTTGAATCCTTTGTTCCCTGAGGAATTACCATGGAAAGATATGGATTGGAGCGGAACTTTAATAGTCATTCAAATCAATTGTTTTGCATGTGGAGGGATCGCGATAAGTATTTGCATGACTCACAAAGTTGGTGATGGTACCACTCTTTTCAACTTCATGAATGATTGGGCCATCATCAACCAAAAGATAgagcaagaagaagaagggtTATTAGTATTACCCGTCCCTTTACTTGGTGAAGGGGCTTCGATTTTTTCCCAGAGGGACTTACCTATTTTTCCAGAACTCAAGCTTGTGAAGGGAAACAAGATGGTGTACAAAAGATTTGTGTTTCAAGCATCAATGATTAAGTCTCTCAAGACAATGGTAACTAATTCCACGAATTCTCCCACACGTGTACAAGTTGTAACTGCATTGATTTATAAGCGTGCGGTTTCAACAATGGGATTAAATTTCAAGATAGCCCCATTTAGCACGGTTGTAGACCTTCGCAGAAGAATGGTTCCTCCATTGTCAGAAAGGTGTGTAGGGAACATAATTTGGTTCTCGTCTATGCAGATAAATAAGAAGGAAATGGAGCTGCCGGAGTTGGTATGCGAAATAAAACAAGGATTATCTGAGTTTTGTGACGTTTATCCGAAACAATTTGCCGGAAAAGAAAAGGACAATTTGTCGTTCATTTCCGGGTGCTTGAAACATGTTAACGATTTTTATACGGATGATCAAACTATGTTTACTTTTAGTAGTTGGTGTGGATTTCCAATATATGAAGTAGATTTTGGGTGGGGAAAACCAACATGGGTGACAACTTTTGGTAGTTCTTTGAGGAATCTAATATTTATGGTGGATACAAGAGATGGGAATGGGATTGAAGCATATGTGAACATGGAAGAGAGTGATATGGCTAGGTTTGAGAATGATGCTGAGCTTCTTAAGTATGCCTCTCTTAATCCTAGTGTTGGACATGATTCATaa 1311 0.36 MEMVLVSRETIKPSSPTPSHLRIYPLSFIDNIFYRKYVPALVFYNTKDCSNQNSKISQLRESLSQVLSKYYPFAGKLKDKTSIECNDQGVSFLVTKVQKNISEILQNPTEELLNPLFPEELPWKDMDWSGTLIVIQINCFACGGIAISICMTHKVGDGTTLFNFMNDWAIINQKIEQEEEGLLVLPVPLLGEGASIFSQRDLPIFPELKLVKGNKMVYKRFVFQASMIKSLKTMVTNSTNSPTRVQVVTALIYKRAVSTMGLNFKIAPFSTVVDLRRRMVPPLSERCVGNIIWFSSMQINKKEMELPELVCEIKQGLSEFCDVYPKQFAGKEKDNLSFISGCLKHVNDFYTDDQTMFTFSSWCGFPIYEVDFGWGKPTWVTTFGSSLRNLIFMVDTRDGNGIEAYVNMEESDMARFENDAELLKYASLNPSVGHDS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01233 436 Pfam Transferase family 5 422 - -
Tsu02g01233 436 Gene3D - 213 426 IPR023213 -
Tsu02g01233 436 PANTHER F21J9.9 5 432 - -
Tsu02g01233 436 Gene3D - 1 201 IPR023213 -
Tsu02g01233 436 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01233 Tsu-Chr2 10466207 10467654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01233 27 417 Monolignol Biosynthesis Gene Families AT5G48930 22.803 5.09e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01233 - - gmx:100806928 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01233 02 10466207 10467654 Tsu02g01233 02 10466207 10467654 ECH