Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01200 aTGAAACCCACGGTAACATTTCTTTTGCTCCTAGTCACAACACTTGTCTTTCATGTTCTTAGATCAATATTTCAAACTACCCTCTCTTGGCCACTGATAATTAATACTCTTTTTATCTCCACCATCCTCGCTATTTCCCTAAATAATTACTGGCCTGTCCCTGGAGGCTTTGCATGGAGGAACTATAACCAAAGCATAAAACTCGTTGGGCCTATGGGTTGGCCCATATTGGGAACTTTACCTCAAATGGGCTCTTTGGCTCACGTAAAACTCGCTTCATTAGCCACTTCTTTAAAAGCGAAGAGGCTAATGGCACTGAGTCTAGGAGCCACACGTGTGGTTATAAGTAGCCACCCTGAAACTGCAAGAGAAATTTTATTTGGATCATCATTTTCTGATCGTCCAATTAAAGAATCAGCACGCTTGCTTATGTTCGAGCGTGCCATTGGTTTCGCTCCTTCCGGAACTTATTGGAAAAAACTAAGAAGGATTGCGGCCTTTAATATGTTCTCTCCAAGGAGAATTCTCGGATTAGAGAGTCTCCGACAACGCGTGGCGGATGAAATGGTGGTGAGAATTTGGAAGGAGATGGAGAAGAAAGGGGTTGTTGAAGTTAGAGGGATATTGCAAGAAGGGTCTTTTAGCAATATTTTGGAGAGTGTGTTTGGTTCCATTagcaattttaattgtttgagtTTAGGAGGAAGTGAGGAGTTGGGGAATATGGTTAAGGAAGGGTATGAGTTAATTGCTAAGTTTAATTTAGAAgattattttccttttaaatttttggacTTTTATGGTGTGAAGAGAAAGTGTCATAAATTGGCGGCTAAGGTCACTAGTGTTGTTGGTCAAATGGTGGAGGAACGAAAAAGAGCTCAAGACTTGCTAATTGGGGAAAATGATTTTCTTAGCACTCTGTTATCTTTACCCAAAGAGGAAAGGTTAGGTGATTCCGATATGGTGGCTATTTTGTGGGAAATGATATTTCGAGGAACAGATACGGTTGCTATACTCTTGGAATGGACCATGGCAAGGATGGTTTTACACCAAGACATACAAATGAAAGCCCGCCAAGAGATTGACATGTGCATTGGCCCAAACAATCAAGTGCGAGACTCGGACATTCCCAATCTCCCTTACCTTCAAGCGATAGTAAAGGAGGTGCTACGACTACACCCACCAGGCCCATTATTGTCTTGGGCTCGTCTTGCTGTCCACGACATTCATGTAGATAAAACTCTAGTGCCAGCTGGTACAACTGCAATGGTAAACATGTGGGCTATATCTCATGACTCTTCTATATGGGAAGACCCCTTGACTTTTAAGCCCGAGCGGTTTCTAAAAGAAGATGTTTCTATTATGGGCTCAGATTTGAGGCTTGCACCTTTCGGTGCAGGCCGTAGGGTTTGCCCAGGAAGAGCTTTGGGCTTAGCTACAGTCCATCTCTGGCTCGCACAACTTCTTCACAATTTTGTGTGGCTTCCAATACAACCTGTTGATCTTTCTGAAAGTCTTAAACTTTCTCTCGAAATGAAGAATCCTTTGCGATGTTCAGTAATTGGTCGTAATGCTCTGAACCCAATCATTTGA 1596 0.416 MKPTVTFLLLLVTTLVFHVLRSIFQTTLSWPLIINTLFISTILAISLNNYWPVPGGFAWRNYNQSIKLVGPMGWPILGTLPQMGSLAHVKLASLATSLKAKRLMALSLGATRVVISSHPETAREILFGSSFSDRPIKESARLLMFERAIGFAPSGTYWKKLRRIAAFNMFSPRRILGLESLRQRVADEMVVRIWKEMEKKGVVEVRGILQEGSFSNILESVFGSISNFNCLSLGGSEELGNMVKEGYELIAKFNLEDYFPFKFLDFYGVKRKCHKLAAKVTSVVGQMVEERKRAQDLLIGENDFLSTLLSLPKEERLGDSDMVAILWEMIFRGTDTVAILLEWTMARMVLHQDIQMKARQEIDMCIGPNNQVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDIHVDKTLVPAGTTAMVNMWAISHDSSIWEDPLTFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATVHLWLAQLLHNFVWLPIQPVDLSESLKLSLEMKNPLRCSVIGRNALNPII 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01200 531 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PANTHER CYTOCHROME P450 78A7-RELATED 10 525 - -
Tsu02g01200 531 Gene3D Cytochrome P450 59 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Tsu02g01200 531 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 10 525 - -
Tsu02g01200 531 SUPERFAMILY Cytochrome P450 70 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01200 531 Pfam Cytochrome P450 70 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01200 Tsu-Chr2 10083356 10085484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01200 37 524 Cytochrome P450 AT1G74110 51.751 2.91e-180 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01200 - - gmx:100817944 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01200 02 10083356 10085484 Tsu02g01200 02 10083356 10085484 ECH