Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01188 ATGGAAATTGTTCGACCTCAGAGTCACCGGAACTTGTTTTCCCCTAACGACGCCGTTTCTGTTCCAACTATTCCCCTCTATCGCTCTGCACCGCCACTCGAAGTCAGACTCGAAGATTTTGAGTCCTTCGCCATCGATCGCCTCCGAATTCTGAAGGGGATTTCTGATGGTATGTCACGGGGGAAGAAACCGGACGAAATGGAAAAATTGGTAAAAGAATCGTGGAAAGTGCACATGAGACATCAGCATGCTTCTGAAGTTCTGAACAAGGATATTATATCTCATTTCGTTTTACGTTTGGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTCTCTATGGAATGTGCGCTTTTTCGCCACCGTTTTCGTTTTCTAACTACTGAAGCTCAGAGGGCAATCATGGATGAATTTGACCTTACTTGCAAGGCTGTTAGCAATGTGGAATTTGAGAACATAAAAGAGAAATTAGGACAAGTTGCACGTTCCATGGGTCAGCCTTCACCCACAGTCGATACTATATTTTACAAGGTGCCATTTGAAGAAGTTCCAGAACTTGTAGCTGGACGTAAAGTGTTTATAAGTCAAGGATATGCTTATGTTGCAATGAATCAGGTTGTTTCACTTGTAGCCACTCTATTCCGCAGTCAGCTGTCAAAGACACTTATCCTTACAAACAGAAAATGGACAGCTTCAATCAGAGATCATGAGAAGCATAGGTTGACTCCTATTGTGGAAGCCTTGAGCTCAAGTTATCTGGGTCCTGATTTTTCTCAGCCAAGAGAATATGCTGAGATATCTTTGAAGGACATTGATCAAGTTGCCAAGACCTCGTTTCCTTTGTGCATGCGTCACCTGTTTGATAAGCTGAAAGAGGACCATCATTTAAAGCATGGTGGGAGGATGCAACTGGGCCTCTTTCTGAAGGGTGTTGGTTTGAACCTGGATGATGCACTTGCGTTTTGGAGAGCTGAGTTCTCTAAGAAGATTGGTTTGGAGAAGTTTGAGAAAGAATATTCATATAACATACGACATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCCGGTGCTGGAGATCAGCATGGTTGCCCCTATCGACAGTTCAGTGAGGAGAATCTAAGAGCTGCTCTCAGCAGAATGGGGGTGAACAGTCGAGCAATGGAAGATGTCATGGACAAAGTGCGAAATAGACATTATCAGTTAGCCTGTACCTTGACATTTGAAGCTCTTCACGGTGTGACATGTGATGCAGGGATTAACCATCCAAATCAATATTTCAGTGACAGTCAAAAGATATTGCAACCAAAGaAGGACTCTTCAGCCTAA 1371 0.4296 MEIVRPQSHRNLFSPNDAVSVPTIPLYRSAPPLEVRLEDFESFAIDRLRILKGISDGMSRGKKPDEMEKLVKESWKVHMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMECALFRHRFRFLTTEAQRAIMDEFDLTCKAVSNVEFENIKEKLGQVARSMGQPSPTVDTIFYKVPFEEVPELVAGRKVFISQGYAYVAMNQVVSLVATLFRSQLSKTLILTNRKWTASIRDHEKHRLTPIVEALSSSYLGPDFSQPREYAEISLKDIDQVAKTSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKIGLEKFEKEYSYNIRHNYGKEGKRTDYTPYSCQKVISSTPGAGDQHGCPYRQFSEENLRAALSRMGVNSRAMEDVMDKVRNRHYQLACTLTFEALHGVTCDAGINHPNQYFSDSQKILQPKKDSSA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01188 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 452 IPR007238 GO:0006269
Tsu02g01188 456 Gene3D - 7 249 - -
Tsu02g01188 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 452 - -
Tsu02g01188 456 CDD PriL_PriS_Eukaryotic 26 444 IPR016558 -
Tsu02g01188 456 Pfam Eukaryotic and archaeal DNA primase, large subunit 176 441 IPR007238 GO:0006269
Tsu02g01188 456 PIRSF DNA_primase_large 3 456 IPR016558 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01188 1 451 Core DNA Replication Machinery Family AT1G67320 65.914 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01188 K02685 - gmx:100816023 826.624