Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g01169 | ATGTCTGATCCGAAGTATGATGTGTTCCTGAGTTTTAGAGGAGAGGATACTCGTAACAACTTCACGAGTCATCTTCATAAAGAATTGTGTGGgaaaaacatcaaaacattCATTGATGATGGACTTGAGAGAGGTGATGAGATTTCCCAAGCACTGTACAAAGCAATAGAAGAATCAACAATATATGTGATCATTTTGTCAAAACACTATGCTTCTTCAAGTTGGTGTTTGGATGAACTGACCGAGATACTGAAATGTAAGGAGAGACGTGGAAGGGAAGTGATACCTGTGTTCTATAAGGTGGATCCATCAAATGTTAGGCATCAGAGACATAGTTATGAAGAAGATTTAGTTAAACATCATCAAAGATTTGGTGACAAAGTAGACGCGTGGAAGGCTGCTCTAACCCAGGTAGCTGGACTCTCAGGCTGGGATTCACAAATAACCAGTCCAGAAAGCATCCTTGTTGAAAAGATTGCGgaggatattttaaaaaaattaaatcgtCATGTCTCAAGTGGTTACTATGAAGGATTGACCGGAATGGACAAGCATATTGAAAAAATCCATTCCTTGATGCAATTAGAGTTGCCGACTGTTCGTATGATTGGAATATGGGGCATGGGAGGGATAGGCAAATCAACAATTGCAAATGCAATCTTTGAAAAATTCGAAACTCAGTTCAATTCAAGATGCTGCATCGTTCCAGATGTTCAAcaacaaatagaaaaaactGATGTAGAACATGTGAAAAACAAATACTTATCAAAACTTCTGAATGAAGACATTAAATCCTCTGAATCTAATAGTTCAATTGTTCGAAAGCTGAAACGGGCAAAGGTTCTTCttgtttttgatgatgtgaaaGATTTTGATCaacttcaaaatttaaatggaaCACATGATAACTTTATTGAGGGGAGTAGAATCATTGTGACTAGTAGAGATAAGCAAGTACTTGAGAATGCCAATGTTGATGAAATATATCATGTTAGTGAAATGGATTATAAAGATTCTCTACAACTCTTCTGTTTATTTGCctttaaacaaaaacaaccaattGAATCTTATTTGAGCTTAGCAGAAAAGGTTTTAGATTATGTTCAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTCAATGCTTTATGGCAAACCAAAAGAAGTATGGGAAACAACAAAAGAACTACCTTCATCCTTCGACCGTTTGGAAAGGCTTGGAGAATTGAGCTTGCGAGGTTGCACAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTTAGTAAACTCTTCGAGTTAAATCTTACCGACTGTGAGTCACTTGAAACTTTTCCGAGCGGcattttcaaattgaaattgACAAGACTCGATTTCTACGGTTGCCCAATGCTTGGGAGCTTTCCAGAAATACCAAATGAGTTTGGTCGCTTGTCATCCTTGATTGAACTTTCACTGCAAGGAAGTAGTATTGTGAACCTTCCTGAGAGTATAGCTCATCTATCAAGTTTGAGATCACTTAATTTAAGTGATTGCAAATTGCTTGAACGTGTACCAAAGCTTCCACCAAATCTAAACGAAGTTTTGGCATTTGATTGTCGTTCCATTAAGAGAATGATGCTAAATTCAGGGTCTGCTTCCAATGAAGATATCTTCGAATTTTATCTCACCAATAGTGAAGAAGTAGATGCTACTTCTTTGAGTAATATTGAAAAGGAAGCATATATTAAGATCAATAATGATGCATATTGGTGGGTGTTGTTCTGTTTTCCAGGAAGTGCAGTTCCTGATTGGTTCCCTCACCGTTGTCAGGGACATTCAATAACTATAAGAAGCAATGATTTATATTTGTACGAGAGAAACAGGCTTATTGGTTTCGCTCTGTGTGTGGTTTTGGGACGTGACTTTCCATACGACATCTTTTGGtttgatattagctttgcatacgcattaaaatttgaatctgatggtcaaacacaatttcatCCCAACAAGCTTGAAGTTAAATATGATTTGAAGGAAATGAGAAGTTTTGTCCAAGATCACACATTACTATGGAAGTATAAATTGGACTTGGCAAGAATTGGCAACGGGCTCATTGATGCCCACACTATCACTTTTCAGATCCTAGATGAGCATGGTAGTCCCTTAAGTTTCCCAACAACTTCGACGGTGAAAGAATGTGGAATATGTCCTCTGTATACCAAacaaaatgatgatgatgatgatgatgatgagggcAACAATGAAGAACCCAGTGGGGATGCAGTGTGTTTCTTGGATTTGGATGTCTCCTTAGGTGGTAACTACGGTGGCATTAATGGTAATGATTTTATAGGGTGA | 2340 | 0.3487 | MSDPKYDVFLSFRGEDTRNNFTSHLHKELCGKNIKTFIDDGLERGDEISQALYKAIEESTIYVIILSKHYASSSWCLDELTEILKCKERRGREVIPVFYKVDPSNVRHQRHSYEEDLVKHHQRFGDKVDAWKAALTQVAGLSGWDSQITSPESILVEKIAEDILKKLNRHVSSGYYEGLTGMDKHIEKIHSLMQLELPTVRMIGIWGMGGIGKSTIANAIFEKFETQFNSRCCIVPDVQQQIEKTDVEHVKNKYLSKLLNEDIKSSESNSSIVRKLKRAKVLLVFDDVKDFDQLQNLNGTHDNFIEGSRIIVTSRDKQVLENANVDEIYHVSEMDYKDSLQLFCLFAFKQKQPIESYLSLAEKVLDYVQGLPLALKVLGSMLYGKPKEVWETTKELPSSFDRLERLGELSLRGCTKLKTIPSSIGNLSKLFELNLTDCESLETFPSGIFKLKLTRLDFYGCPMLGSFPEIPNEFGRLSSLIELSLQGSSIVNLPESIAHLSSLRSLNLSDCKLLERVPKLPPNLNEVLAFDCRSIKRMMLNSGSASNEDIFEFYLTNSEEVDATSLSNIEKEAYIKINNDAYWWVLFCFPGSAVPDWFPHRCQGHSITIRSNDLYLYERNRLIGFALCVVLGRDFPYDIFWFDISFAYALKFESDGQTQFHPNKLEVKYDLKEMRSFVQDHTLLWKYKLDLARIGNGLIDAHTITFQILDEHGSPLSFPTTSTVKECGICPLYTKQNDDDDDDDEGNNEEPSGDAVCFLDLDVSLGGNYGGINGNDFIG | 779 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g01169 | 779 | SUPERFAMILY | RNI-like | 393 | 534 | - | - | |
Tsu02g01169 | 779 | SMART | till_3 | 5 | 141 | IPR000157 | GO:0007165 | |
Tsu02g01169 | 779 | Gene3D | Ribonuclease Inhibitor | 470 | 540 | IPR032675 | - | |
Tsu02g01169 | 779 | Pfam | C-JID domain | 589 | 736 | IPR045344 | - | |
Tsu02g01169 | 779 | Gene3D | - | 2 | 170 | IPR035897 | - | |
Tsu02g01169 | 779 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 402 | 521 | - | - | |
Tsu02g01169 | 779 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 4 | 392 | - | - | |
Tsu02g01169 | 779 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 3 | 144 | IPR035897 | - | |
Tsu02g01169 | 779 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 402 | 521 | IPR044974 | GO:0006952 | |
Tsu02g01169 | 779 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 4 | 392 | IPR044974 | GO:0006952 | |
Tsu02g01169 | 779 | PRINTS | Disease resistance protein signature | 202 | 217 | - | - | |
Tsu02g01169 | 779 | PRINTS | Disease resistance protein signature | 275 | 289 | - | - | |
Tsu02g01169 | 779 | PRINTS | Disease resistance protein signature | 368 | 382 | - | - | |
Tsu02g01169 | 779 | PRINTS | Disease resistance protein signature | 498 | 514 | - | - | |
Tsu02g01169 | 779 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 162 | 394 | IPR027417 | - | |
Tsu02g01169 | 779 | Gene3D | - | 171 | 329 | IPR027417 | - | |
Tsu02g01169 | 779 | ProSiteProfiles | TIR domain profile. | 4 | 167 | IPR000157 | GO:0007165 | |
Tsu02g01169 | 779 | Gene3D | Ribonuclease Inhibitor | 390 | 469 | IPR032675 | - | |
Tsu02g01169 | 779 | Pfam | NB-ARC domain | 184 | 392 | IPR002182 | GO:0043531 | |
Tsu02g01169 | 779 | Pfam | TIR domain | 5 | 177 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g01169 | Tsu-Chr2 | 9780801 | 9789047 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g01169 | 394 | 575 | WRKY Transcription Factor Family | AT4G12020 | 26.923 | 5.82e-06 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g01169 | - | - | ccaj:109803335 | 456.062 |