Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01169 ATGTCTGATCCGAAGTATGATGTGTTCCTGAGTTTTAGAGGAGAGGATACTCGTAACAACTTCACGAGTCATCTTCATAAAGAATTGTGTGGgaaaaacatcaaaacattCATTGATGATGGACTTGAGAGAGGTGATGAGATTTCCCAAGCACTGTACAAAGCAATAGAAGAATCAACAATATATGTGATCATTTTGTCAAAACACTATGCTTCTTCAAGTTGGTGTTTGGATGAACTGACCGAGATACTGAAATGTAAGGAGAGACGTGGAAGGGAAGTGATACCTGTGTTCTATAAGGTGGATCCATCAAATGTTAGGCATCAGAGACATAGTTATGAAGAAGATTTAGTTAAACATCATCAAAGATTTGGTGACAAAGTAGACGCGTGGAAGGCTGCTCTAACCCAGGTAGCTGGACTCTCAGGCTGGGATTCACAAATAACCAGTCCAGAAAGCATCCTTGTTGAAAAGATTGCGgaggatattttaaaaaaattaaatcgtCATGTCTCAAGTGGTTACTATGAAGGATTGACCGGAATGGACAAGCATATTGAAAAAATCCATTCCTTGATGCAATTAGAGTTGCCGACTGTTCGTATGATTGGAATATGGGGCATGGGAGGGATAGGCAAATCAACAATTGCAAATGCAATCTTTGAAAAATTCGAAACTCAGTTCAATTCAAGATGCTGCATCGTTCCAGATGTTCAAcaacaaatagaaaaaactGATGTAGAACATGTGAAAAACAAATACTTATCAAAACTTCTGAATGAAGACATTAAATCCTCTGAATCTAATAGTTCAATTGTTCGAAAGCTGAAACGGGCAAAGGTTCTTCttgtttttgatgatgtgaaaGATTTTGATCaacttcaaaatttaaatggaaCACATGATAACTTTATTGAGGGGAGTAGAATCATTGTGACTAGTAGAGATAAGCAAGTACTTGAGAATGCCAATGTTGATGAAATATATCATGTTAGTGAAATGGATTATAAAGATTCTCTACAACTCTTCTGTTTATTTGCctttaaacaaaaacaaccaattGAATCTTATTTGAGCTTAGCAGAAAAGGTTTTAGATTATGTTCAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTCAATGCTTTATGGCAAACCAAAAGAAGTATGGGAAACAACAAAAGAACTACCTTCATCCTTCGACCGTTTGGAAAGGCTTGGAGAATTGAGCTTGCGAGGTTGCACAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTTAGTAAACTCTTCGAGTTAAATCTTACCGACTGTGAGTCACTTGAAACTTTTCCGAGCGGcattttcaaattgaaattgACAAGACTCGATTTCTACGGTTGCCCAATGCTTGGGAGCTTTCCAGAAATACCAAATGAGTTTGGTCGCTTGTCATCCTTGATTGAACTTTCACTGCAAGGAAGTAGTATTGTGAACCTTCCTGAGAGTATAGCTCATCTATCAAGTTTGAGATCACTTAATTTAAGTGATTGCAAATTGCTTGAACGTGTACCAAAGCTTCCACCAAATCTAAACGAAGTTTTGGCATTTGATTGTCGTTCCATTAAGAGAATGATGCTAAATTCAGGGTCTGCTTCCAATGAAGATATCTTCGAATTTTATCTCACCAATAGTGAAGAAGTAGATGCTACTTCTTTGAGTAATATTGAAAAGGAAGCATATATTAAGATCAATAATGATGCATATTGGTGGGTGTTGTTCTGTTTTCCAGGAAGTGCAGTTCCTGATTGGTTCCCTCACCGTTGTCAGGGACATTCAATAACTATAAGAAGCAATGATTTATATTTGTACGAGAGAAACAGGCTTATTGGTTTCGCTCTGTGTGTGGTTTTGGGACGTGACTTTCCATACGACATCTTTTGGtttgatattagctttgcatacgcattaaaatttgaatctgatggtcaaacacaatttcatCCCAACAAGCTTGAAGTTAAATATGATTTGAAGGAAATGAGAAGTTTTGTCCAAGATCACACATTACTATGGAAGTATAAATTGGACTTGGCAAGAATTGGCAACGGGCTCATTGATGCCCACACTATCACTTTTCAGATCCTAGATGAGCATGGTAGTCCCTTAAGTTTCCCAACAACTTCGACGGTGAAAGAATGTGGAATATGTCCTCTGTATACCAAacaaaatgatgatgatgatgatgatgatgagggcAACAATGAAGAACCCAGTGGGGATGCAGTGTGTTTCTTGGATTTGGATGTCTCCTTAGGTGGTAACTACGGTGGCATTAATGGTAATGATTTTATAGGGTGA 2340 0.3487 MSDPKYDVFLSFRGEDTRNNFTSHLHKELCGKNIKTFIDDGLERGDEISQALYKAIEESTIYVIILSKHYASSSWCLDELTEILKCKERRGREVIPVFYKVDPSNVRHQRHSYEEDLVKHHQRFGDKVDAWKAALTQVAGLSGWDSQITSPESILVEKIAEDILKKLNRHVSSGYYEGLTGMDKHIEKIHSLMQLELPTVRMIGIWGMGGIGKSTIANAIFEKFETQFNSRCCIVPDVQQQIEKTDVEHVKNKYLSKLLNEDIKSSESNSSIVRKLKRAKVLLVFDDVKDFDQLQNLNGTHDNFIEGSRIIVTSRDKQVLENANVDEIYHVSEMDYKDSLQLFCLFAFKQKQPIESYLSLAEKVLDYVQGLPLALKVLGSMLYGKPKEVWETTKELPSSFDRLERLGELSLRGCTKLKTIPSSIGNLSKLFELNLTDCESLETFPSGIFKLKLTRLDFYGCPMLGSFPEIPNEFGRLSSLIELSLQGSSIVNLPESIAHLSSLRSLNLSDCKLLERVPKLPPNLNEVLAFDCRSIKRMMLNSGSASNEDIFEFYLTNSEEVDATSLSNIEKEAYIKINNDAYWWVLFCFPGSAVPDWFPHRCQGHSITIRSNDLYLYERNRLIGFALCVVLGRDFPYDIFWFDISFAYALKFESDGQTQFHPNKLEVKYDLKEMRSFVQDHTLLWKYKLDLARIGNGLIDAHTITFQILDEHGSPLSFPTTSTVKECGICPLYTKQNDDDDDDDEGNNEEPSGDAVCFLDLDVSLGGNYGGINGNDFIG 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01169 779 SUPERFAMILY RNI-like 393 534 - -
Tsu02g01169 779 SMART till_3 5 141 IPR000157 GO:0007165
Tsu02g01169 779 Gene3D Ribonuclease Inhibitor 470 540 IPR032675 -
Tsu02g01169 779 Pfam C-JID domain 589 736 IPR045344 -
Tsu02g01169 779 Gene3D - 2 170 IPR035897 -
Tsu02g01169 779 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 402 521 - -
Tsu02g01169 779 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 392 - -
Tsu02g01169 779 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 144 IPR035897 -
Tsu02g01169 779 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 402 521 IPR044974 GO:0006952
Tsu02g01169 779 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 392 IPR044974 GO:0006952
Tsu02g01169 779 PRINTS Disease resistance protein signature 202 217 - -
Tsu02g01169 779 PRINTS Disease resistance protein signature 275 289 - -
Tsu02g01169 779 PRINTS Disease resistance protein signature 368 382 - -
Tsu02g01169 779 PRINTS Disease resistance protein signature 498 514 - -
Tsu02g01169 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 394 IPR027417 -
Tsu02g01169 779 Gene3D - 171 329 IPR027417 -
Tsu02g01169 779 ProSiteProfiles TIR domain profile. 4 167 IPR000157 GO:0007165
Tsu02g01169 779 Gene3D Ribonuclease Inhibitor 390 469 IPR032675 -
Tsu02g01169 779 Pfam NB-ARC domain 184 392 IPR002182 GO:0043531
Tsu02g01169 779 Pfam TIR domain 5 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01169 Tsu-Chr2 9780801 9789047 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01169 394 575 WRKY Transcription Factor Family AT4G12020 26.923 5.82e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01169 - - ccaj:109803335 456.062