Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01167 ATGTCCGATTTGATGTATAATATGTTCATGAGCTTTGAAGGAGACGATCCTGACAACTTCATGAGTCATATTAATGCACAAATAGAATTGTGTAGGAAAAATCTTGAGACATTTATAGATACACTTGGTATAAACGAAGAGATTTCACTAGCACCGTACAAAGCATTTGAAGAATTATTAAAGATGTCTCATCCAGCAACTCCAAAGTATGATGTGTTCCTGAGCTTTAGAGGAGTGGACACTCGTGATAACTTCACGAGTCATCTTTATGCTGAATTATGTAGGAAAAAGATTGAAACATTCATAGATTATAGACTCAAGAGAGGTGATGAGATTAACTCATCCCTGATCAAAGCAATTGAAGAATCACTCATTTATGTGGTCATTTTGTCAAAACACTATGCTTCTTCCAGCTGGTGCTTAGATGAACTGACAGAGATACTGAAATGTAAGGAGAAATATGGAAGGGAAGTCATACCTGTGTTCTATGAAGTGGATCCAGCAGATGTTAGGCATCAGAGAAAGAGTTATGCAGACGATTTTGCTAAGCATCAAGAACGAAATAGCGGTAAAGTGGATGAGTGGAAGGCTGCTCTAAACCAAGTAGCTGGACTCTCAGGCTGGCATTCACAAGTAACCAGACCAGAGAGCAAGCTTGTTATAGAGACTGTTAATGATATTGTGAAAAAATTGAATCGTTGTGTGTTAAGCAATTATCAAGGAATGATTGGAATTGACAAGCATATTGAACAAATCCAAACCTTGTTACACCTCGAGTCATCGAGTATCATAGGAATATGGGGCATGGGAGGTATAGGCAAATCAACAATTGCCAGTGCAATTTATAGTAAACTCATAACTAATTTCAATTCTGGATGCATAATTCTAAATGTATAccaagaaatagaaaaaattggaCTTCAGAGTGTACGGATAAAATACTTATCACAGCTTCTGGGGGAAGAAATTACATCCTCTGAATACAACTTTACATTTGATCCAAGGCTAAAACGGATAAAGGTTCTTCttgtttttgatgatgtgaaaGATTCTGATCAACTTGAACATTTAATTGGAACACCTGCTCTCAAAGTTTTGGGCAAATTTCTTCAGGGCAGACAAAAGGAAGAATGGGAAAGTCAATTGCAAAAGCTTGAAAAGCTTCCCCATCCTGACATTTTCAATTTGTTGAAGTTAAGTTATGATGGACTTGATGATGATCAAAAGAATATATTTCTTGACATAGCTTGCTTCTACAGAGGAGAATATGTGAAAGTTGTAGAACATACGTTGGATTGTTGTGGTTTCTTTACCCGCATTGGAATGAAAGTTCTCGAAGATAGGTGCCTTATATCTATTTCAGGAGGTAAAGTTTGGTTGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTCGACTTCAAAATATAGATCCTGGAAAACGCAGTCGATTATGGAAGCCTGCTGAAATTTATAGAGTTTTCAAAAAGGACAAGGGAACACATGAAATCCAATGTATATTTCTGGACATGTTGAAAATTAAGAAAGTTCAACTACATGCTAAAACTTTTAAGGAAATGTGTAATCTCAGaataatcaaattcaattctgAGATTGCGGGCAAACGTGGAAAATGTGTGAACCAAAATGTGACCTTTCAAACATTTCTTGAGAGCCTTCCGAATACTTTAAACGTTCTTCAATGGACGACCTTCCCTCAAAGATCTTTGCCGCAAGACTTCTGCCCAGAAAATCTTGTTACACTTAGTATGTGTTATAGCAATCTTAAACAACTTTGGGAGGAGGAGGATCAGGCTTTACCAAATTTGAAAAGGCTTAACCTTAGCAATTCTGTGGAGCTGACAAGATTACCAGACCTCTCTTTGTGTCCAAATATTGAAGAAGTAATTCTTACTGGTTGTGTAAGTTTGATACATGTTTACTCCTCTAGCTTCCTCGACAACCTTAACTGGTTATGTTTAGATGGTTGTACCAAACTCGAGAGTTTAAACATTTATAGCAATATTCTGTGGAGATCATCTGGATTAGTTGCTCTACATGGTTGTCTCAACCTTCAAACACTTTTAATCAACAGTAGAACTGATGTGGTCCAATCATATGGTTCGCCTCCTTTTATTCCAGATTTATCGGTATGTGTTTTTAATGAAGAAATGATATTACAGAATAAGGGTGAAGGGGGTTACAATATTAGGAAATTTCATGACTATCGCTTTACAAGGATCAGTGAGTTACGTTATTtcggaaaaataaataaaagtatcgATGAGTTTTGTTGGTTAGATGTTTCGAATTGTATGTCCCTAACCTGCCTACCAGCTGAACTTTTAAATTTGAAGTTTCTAACAAGACTTTCTCTCAGTGGTTGTTTAAAGTTGGAGGAGTTACCTGAAATCAAGGAGACTACGGAAAATCTAAAAGTGCTCAACTTAGACAAAACAGCAATAATAGAACTACCATCATCCTTACACCATTTGGTCGGGCTTGAAGAATTAAGCTTGAAAAGTTGCACAAAACTTAAGACTATTCCATCTTCCATTGGAAATCTCAGTAAACTCCTCAAGTTAAACCTTGCTCATTGTGCATCACTTGAAACTTTTCCAAACAGCATTTTCAAATTGAAGTTGACAGAACTCAATTTCAAGGGTTGCTCAATGCTTAGGACCTTTCCAGAGATCATGGAGCCTGCAGAAAGTTTTACTCACATCAACTTAACAGAAACAGCAATCAAAGATTTGCCTTCATCATTGGAGTATTTAGTTGGCCTTCAAAGATTGAACCTAAAACTTTGCAGTAATCTAGTCTCACTTCCAAACAGCATTGTTAAACTAAGTCTTCTATCCCATCTTGATTGTTCTGGCTGTTGCAGATTAACAGAAATCCCAAATAACATCGGTTGCCTGTCATCCTTGACTAAACTTTCACTGCAAGAAAGCGGTATTGTGAACCTTCCTGAGAGTATGGCTCATCTCTCAAGTTTGAAATCACTTAATTTAAATGGTTGCAAATTGCTTGAATGTGTTCCAAAGCTTCCACCAAATCTAACCCAAGTTCAGTCATTTAATTGCCCTTCCATTAAGAGAATGGTGCTAAATTCAAGGTTGAGGAGACTCGTGTCTGATTCCAAAGAAGGTACCTATGTATTTGGTCTCACCAATAGTCAAGAACTAGATACCACTTCTAGGAGTGATATTGTAGGCAGAGCATGTATTAAGATCACTGATGATGCATATAAGTCAGTGTTCTTCTACTTTCCTAGGAGTACAGTTCCTCGCTGGATCCATTACAGTTGCCCGGGTGATTCGGTAACTATGAAAAAAGATTCTCCAAATTTGTGCAGTAAAAATAGGCTCATTGGTTTCGCTTTGTGTGCTATTATGGATGGCACAAGAACGAATTTTGGATTTAGGTacaattttagatttatatcAGATGGTGAAATATACTCTTGTAACCACTTTATGCCTGGCGACATTTTGAATAGGGATAGCTCTCGTTTATTTCTATGGAAGCATCCATTAGACTTAGAAGCAATTGGCAACAAGCTCTTTCATGCTGAAAACTTCACTTTTGAGTTTCAATCAGATTTCAAAGTGAAAGAATTTGGAATGTGTCCTATGTATACCAAAAGAATTGATGATAATAGCATTGAAGAACCGAGTGGGAGCAAAGCTGCAGAATAA 3702 0.362 MSDLMYNMFMSFEGDDPDNFMSHINAQIELCRKNLETFIDTLGINEEISLAPYKAFEELLKMSHPATPKYDVFLSFRGVDTRDNFTSHLYAELCRKKIETFIDYRLKRGDEINSSLIKAIEESLIYVVILSKHYASSSWCLDELTEILKCKEKYGREVIPVFYEVDPADVRHQRKSYADDFAKHQERNSGKVDEWKAALNQVAGLSGWHSQVTRPESKLVIETVNDIVKKLNRCVLSNYQGMIGIDKHIEQIQTLLHLESSSIIGIWGMGGIGKSTIASAIYSKLITNFNSGCIILNVYQEIEKIGLQSVRIKYLSQLLGEEITSSEYNFTFDPRLKRIKVLLVFDDVKDSDQLEHLIGTPALKVLGKFLQGRQKEEWESQLQKLEKLPHPDIFNLLKLSYDGLDDDQKNIFLDIACFYRGEYVKVVEHTLDCCGFFTRIGMKVLEDRCLISISGGKVWLHDLIQEMGHEIVRLQNIDPGKRSRLWKPAEIYRVFKKDKGTHEIQCIFLDMLKIKKVQLHAKTFKEMCNLRIIKFNSEIAGKRGKCVNQNVTFQTFLESLPNTLNVLQWTTFPQRSLPQDFCPENLVTLSMCYSNLKQLWEEEDQALPNLKRLNLSNSVELTRLPDLSLCPNIEEVILTGCVSLIHVYSSSFLDNLNWLCLDGCTKLESLNIYSNILWRSSGLVALHGCLNLQTLLINSRTDVVQSYGSPPFIPDLSVCVFNEEMILQNKGEGGYNIRKFHDYRFTRISELRYFGKINKSIDEFCWLDVSNCMSLTCLPAELLNLKFLTRLSLSGCLKLEELPEIKETTENLKVLNLDKTAIIELPSSLHHLVGLEELSLKSCTKLKTIPSSIGNLSKLLKLNLAHCASLETFPNSIFKLKLTELNFKGCSMLRTFPEIMEPAESFTHINLTETAIKDLPSSLEYLVGLQRLNLKLCSNLVSLPNSIVKLSLLSHLDCSGCCRLTEIPNNIGCLSSLTKLSLQESGIVNLPESMAHLSSLKSLNLNGCKLLECVPKLPPNLTQVQSFNCPSIKRMVLNSRLRRLVSDSKEGTYVFGLTNSQELDTTSRSDIVGRACIKITDDAYKSVFFYFPRSTVPRWIHYSCPGDSVTMKKDSPNLCSKNRLIGFALCAIMDGTRTNFGFRYNFRFISDGEIYSCNHFMPGDILNRDSSRLFLWKHPLDLEAIGNKLFHAENFTFEFQSDFKVKEFGMCPMYTKRIDDNSIEEPSGSKAAE 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01167 1233 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 835 1047 - -
Tsu02g01167 1233 SUPERFAMILY "Winged helix" DNA-binding domain 392 495 IPR036390 -
Tsu02g01167 1233 ProSiteProfiles TIR domain profile. 68 231 IPR000157 GO:0007165
Tsu02g01167 1233 Pfam Leucine Rich Repeat 585 602 IPR011713 -
Tsu02g01167 1233 Gene3D Ribonuclease Inhibitor 732 1069 IPR032675 -
Tsu02g01167 1233 Gene3D Ribonuclease Inhibitor 505 717 IPR032675 -
Tsu02g01167 1233 SUPERFAMILY L domain-like 765 1031 - -
Tsu02g01167 1233 SMART till_3 69 205 IPR000157 GO:0007165
Tsu02g01167 1233 Gene3D - 65 233 IPR035897 -
Tsu02g01167 1233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 362 699 IPR044974 GO:0006952
Tsu02g01167 1233 PRINTS Disease resistance protein signature 263 278 - -
Tsu02g01167 1233 PRINTS Disease resistance protein signature 995 1011 - -
Tsu02g01167 1233 PRINTS Disease resistance protein signature 335 349 - -
Tsu02g01167 1233 SUPERFAMILY Toll/Interleukin receptor TIR domain 67 208 IPR035897 -
Tsu02g01167 1233 Pfam TIR domain 69 238 IPR000157 GO:0007165
Tsu02g01167 1233 SUPERFAMILY RNI-like 566 817 - -
Tsu02g01167 1233 Pfam C-JID domain 1091 1217 IPR045344 -
Tsu02g01167 1233 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 362 699 - -
Tsu02g01167 1233 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 62 359 - -
Tsu02g01167 1233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 835 1047 IPR044974 GO:0006952
Tsu02g01167 1233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 359 IPR044974 GO:0006952
Tsu02g01167 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 415 IPR027417 -
Tsu02g01167 1233 Gene3D - 234 370 IPR027417 -
Tsu02g01167 1233 Pfam NB-ARC domain 246 357 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01167 Tsu-Chr2 9752135 9764185 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01167 763 946 WRKY Transcription Factor Family AT4G12020 35.829 1.91e-18 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01167 - - mtr:MTR_8g090280 993.03