Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01165 ATGGATCCTACAATGGATGAACTTGGATCACAATTTATTTGGGCTTGGATCACAATGGATGGACTTAAggaaaaatatcaatttctaACAGAACTCAATTTCAAAGGCTGCTCAATGCTTCAGACCTTTCCAGAAATCTTGGAGCCTGCAGAAAGTTTTACTCACATTAACTTAACAAATACAGCAATTAAAGATTTGCCTTCATCATTGGAGCATTTAGTTGGGCTTCAaagattgaaattgaaactttgCAGTAATCTAGTCTCACTTCCAAACAGCATTGTTAAACTAAGTCTTCTATCCCATCTTGATTGTTCTGGCTGTTGCAGATTAACAGAAATCCCAAATAACATCGGTTGCTTGTCATCCTTGACTGAACTTTCACTGCAAGGAAGCAGTATTGTGAACCTTCCTGAGAGTATGGTGCATCTCTCAGTTTTGAAATCACTTGATTTAACTGATTGCAAACGTCTTGCTGTCCCAAATAACATCGGTTGCTTGTCATCGTTGACTAAACTTTCCCTGGAAGGAAGTAGTATTGTGAACCTTCCCGAGAGTATGGCTCACCTCTCAAGTTTGAAATCGCTTAATTTAAGTGGTTGCAAATTACTTGAAAGTGTTCTAAAGCTTCCACCAAATCTAAACCAAGTTTCAGCATTTGATTGCCCTTCCATTAAGAAAATGGTGCTAAATTCAAGGTCTAATTCCAGAGAAGGTATCTTCAAATTTCATCTCACCAATAATCAAGAAATAGATGCGGCTTTTTGGAGTAATATTGGAGAGGAAGTATGTATTAAGATCACCGACAAAGCATATTGGCCAGTGGTCTTCTGTTTTCCAGGGAGTGTAGTTCCTCGCTGGTTCCATTACTGTTGCAAGGGACATTCAGTAACTATGGAAAAAGTCTCTCCAAATTTGCTAATTGGTTTCGCTCTGTGTGTTGTTTTGGGACCAGAAGAAGATATGTATGCCATGAGAATAGGGAAGGCTCGAGTTATGTACAAATTTGGATTTATATCAGATGGTGAAATGTACTCTTATGACCACTGCTATATGCCTGAAGGAATTTCGAATTGGAGTAGTCAAGATAGATTTATCAACCAAGATCACACATTGATATGGAAGCATCAATTAAACTTAAGAATTGACATGGAGCGCTTTCATGATGCCCACAGCTTCACTTTTGAGATcctagatgatgatgatgatgagccaTGTTTTCTCACTCGTATTCAATCAAGCACAGTGAAAGAATGTGGAATATGTCCTCtatga 1275 0.3655 MDPTMDELGSQFIWAWITMDGLKEKYQFLTELNFKGCSMLQTFPEILEPAESFTHINLTNTAIKDLPSSLEHLVGLQRLKLKLCSNLVSLPNSIVKLSLLSHLDCSGCCRLTEIPNNIGCLSSLTELSLQGSSIVNLPESMVHLSVLKSLDLTDCKRLAVPNNIGCLSSLTKLSLEGSSIVNLPESMAHLSSLKSLNLSGCKLLESVLKLPPNLNQVSAFDCPSIKKMVLNSRSNSREGIFKFHLTNNQEIDAAFWSNIGEEVCIKITDKAYWPVVFCFPGSVVPRWFHYCCKGHSVTMEKVSPNLLIGFALCVVLGPEEDMYAMRIGKARVMYKFGFISDGEMYSYDHCYMPEGISNWSSQDRFINQDHTLIWKHQLNLRIDMERFHDAHSFTFEILDDDDDEPCFLTRIQSSTVKECGICPL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01165 424 Pfam C-JID domain 279 421 IPR045344 -
Tsu02g01165 424 Gene3D Ribonuclease Inhibitor 19 247 IPR032675 -
Tsu02g01165 424 PANTHER - 133 227 - -
Tsu02g01165 424 PANTHER - 28 225 - -
Tsu02g01165 424 SUPERFAMILY RNI-like 26 235 - -
Tsu02g01165 424 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 133 227 - -
Tsu02g01165 424 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 28 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01165 Tsu-Chr2 9690235 9692210 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01165 40 205 WRKY Transcription Factor Family AT4G12020 31.500 7.11e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01165 - - lja:Lj4g3v3113360.1 326.25