Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g01152 | ATGCTCCAATTCTCTTTCTTCTTAATTTCCATCATCACCGCCACCACCGTCGTCGTCGCCGATAATGACGACGACTCCGCCTTCATGTTAAACCTTCTAAATTCCCTAAAACCACCTCCATCCGGTTGGTCTTCCGATACTCAATTCTGTAAATGGGACGACAAAATCAAGTGCGATTCATCAAACCGCCACGTAACCTCCATAGACCTCTCTTCTCGAAACCTCGCCGGAACCCTACCTTCCAATCTCAACTCTCTCACTCAACTCACAATTCTCAATCTCCAAAACAACAATTTCTCCGGTCCTCTTCCTTCTCTCGCTAACCTCTCCTCTCTCACAATCGCCTATCTCGGTAATAACCAATTCAATGCCGTACCTCCCGCCGCATTTTCCGGCCTAACTTCACTCCAAAACCTTAGCATCAGCAAAAATGATTTTCAACCATGGACATTCCCTTCCGAGTTAACTCAATCTTCCAATCTCAACTaccttgattttgattttgcaaACATCAACGGAACCTTACCGGACATTTTCAACAATTTCACTAGTCTCACCGAACTTCATCTTGCCTACAACAATCTCATCGGAGAATTACCTAATTCTCTTGCCACTTCCTCAATCCAAAAGTTATGGCTCAATAACAACAAATTCGGGTTAACAGGTTCAATCGCCGTGATTGCCAATATGACGCAGTTAACTCAGGTATGGCTTCATGTTAATCAGTTCACTGGTCCAATTCCAGATTTAACGCAATGCACGAATTTGTATGAATTGCTACTTAGGGATAATCACTTAACCGGTTTGGTTCCTGTTTCTCTGTTGAATAATATGCCTAGCTTGCAGACAGTTTCTCTTAGAAATAATGATCTTCAGGGACCTTTTcctgtttttaaaaataaaaatgtgaaatttgaaGCTGATGGGAGAAATCATTTTTGTCTTGGTAATAAAACAGGACCTTGTAATGATATGGTTATGGTTATGCTTCAAATTGCTGGGGGATTTGGGTATCCTCTTAAATTGGCGCAGTCGTGGACAGGGAATGATCCTTGTCAAGGTTGGCAGATTGTTACGTGTGATAAGGATAAGAATATTGAGTCTGTGGTTTTAGTGAAGCAGAATTTGCAGGGAACAATTTCGCCTGCTTTtgccaatttgaaaaaattgaagaaattgatTCTATCTGGGAATAATTTAACTGGTTCTATACCTCAGAGTTTGACTACATTGTCTCAGCTTGAGACACTTGATGTCTCTAACAATAACCTATCAGGAGAGGTTCCCAAATTCTCACCGAAAGTGAAGTTAGTAACCGATGGTAATGTTTGGATTGGTAAAAATCCTGATTCTGGTCCCAATGGAAGGACTGATGGACCGGGAAAGGGTAATTCGATGGCGCCAGGTTCGATTGCTGGTATAGTTATTATTGTTGtgctttttgttgttgctgtGTTGTTTGTTTCTTGGAAGTGTTGTTCTAGAAAGCGGCTTCGGAAATTTGCAAGGGTTAGTAATCCTGAAAATGGGAAAGGAAATGTTAAGCTTGATCTTGCACGTGTTTCGAATGGATATGGTGGTGTTCCGAGCGAGTTGCAAAGCCAGAGCAGTGGTGATTATAGTCAGCTTCATGGTTTTGATGGGGGAAGTGACGTAAATCCTACAATTTCGATTGATATTCTTCGGCAAGTGACAAATGATTTCAGCGACGATAACATTTTGGGAAGGGGAGGGTTTGGTATTGTTTATAAAGGGGAGTTACCTGATGGAACTAAAATTGCTGTCAAGCGGATGATATCCGTTGCATCAGGAAGCAAAGGGTTGAATGAGTTCGAAGCAGAGATTTCTGTTCTTACTAAGGTTAGGCATAGACATCTGGTTGCTCTTATGGGATATTGCATCAATGGAAACGAGAGGCTTTTGGTGTATGAGCATATGCCTCAAGGGACATTAACACAGCATCTGTTTGAATGTCGTGAACATGGGTATACTCCTTTGACATGGAAACAAAGGTTGGTAATAGCTTTGGATGTTGGACGGGGGGTGGAATACTTGCACAGCTTAGCTCGGCAAAGCTTCATTCATAGAGACTTAAAACCATCAAATATACTATTAGGTGATGATATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCGGATGGGAAGCATTCTATTGAGACAAAGTTGGCTGGAACATTTGGATATCTTGCACCCGAGTATGCAGCTACCGGAAAAGTGACAACCAAAGTGGATGTTTACGCGTTTGGGGTAGTTTTGATGGAACTGATCACAGGTAGAAAGGCATTAGACAATACTGTGCCTGGTGAAAGGTCTCATTTGGTTACTTGGTTCCGTAGGGTACTGATTAACAAGGAAGACATTCCAAAGGCAATTGATCAAACTCTCGACCCAGATGAAGAAACAATGTTGAGCATATATGAAGTGGCTGAGCTGGCTGGCCATTGCACCGTTCGTGAACCATATCAAAGGCCAGATATGGGGCATGCCGTGAATGTGTTGGGTCCCCTTGTGCAGCTATGGAAACCTACTACCCAAATAGACGAAGGAAGTTATGGCGTTGACAATCAGACGAGTCTTGCTGAAGCACTACGAAGGTGGCAAGCCCATGAAGGCACTTCAATGATATTTAGTGACATTTCCTCCTCACAAACCCAAACAAGTTCTAAATCTCCATTATTTGCAGGCAACTTTGATTCACCAGATTGCCGGTAG | 2745 | 0.4124 | MLQFSFFLISIITATTVVVADNDDDSAFMLNLLNSLKPPPSGWSSDTQFCKWDDKIKCDSSNRHVTSIDLSSRNLAGTLPSNLNSLTQLTILNLQNNNFSGPLPSLANLSSLTIAYLGNNQFNAVPPAAFSGLTSLQNLSISKNDFQPWTFPSELTQSSNLNYLDFDFANINGTLPDIFNNFTSLTELHLAYNNLIGELPNSLATSSIQKLWLNNNKFGLTGSIAVIANMTQLTQVWLHVNQFTGPIPDLTQCTNLYELLLRDNHLTGLVPVSLLNNMPSLQTVSLRNNDLQGPFPVFKNKNVKFEADGRNHFCLGNKTGPCNDMVMVMLQIAGGFGYPLKLAQSWTGNDPCQGWQIVTCDKDKNIESVVLVKQNLQGTISPAFANLKKLKKLILSGNNLTGSIPQSLTTLSQLETLDVSNNNLSGEVPKFSPKVKLVTDGNVWIGKNPDSGPNGRTDGPGKGNSMAPGSIAGIVIIVVLFVVAVLFVSWKCCSRKRLRKFARVSNPENGKGNVKLDLARVSNGYGGVPSELQSQSSGDYSQLHGFDGGSDVNPTISIDILRQVTNDFSDDNILGRGGFGIVYKGELPDGTKIAVKRMISVASGSKGLNEFEAEISVLTKVRHRHLVALMGYCINGNERLLVYEHMPQGTLTQHLFECREHGYTPLTWKQRLVIALDVGRGVEYLHSLARQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKHSIETKLAGTFGYLAPEYAATGKVTTKVDVYAFGVVLMELITGRKALDNTVPGERSHLVTWFRRVLINKEDIPKAIDQTLDPDEETMLSIYEVAELAGHCTVREPYQRPDMGHAVNVLGPLVQLWKPTTQIDEGSYGVDNQTSLAEALRRWQAHEGTSMIFSDISSSQTQTSSKSPLFAGNFDSPDCR | 914 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g01152 | 914 | CDD | STKc_IRAK | 574 | 847 | - | - | |
Tsu02g01152 | 914 | PANTHER | RECEPTOR-LIKE KINASE TMK4 | 12 | 899 | - | - | |
Tsu02g01152 | 914 | ProSiteProfiles | Leucine-rich repeat profile. | 88 | 110 | IPR001611 | GO:0005515 | |
Tsu02g01152 | 914 | SMART | LRR_typ_2 | 133 | 158 | IPR003591 | - | |
Tsu02g01152 | 914 | SMART | LRR_typ_2 | 411 | 433 | IPR003591 | - | |
Tsu02g01152 | 914 | SMART | LRR_typ_2 | 387 | 410 | IPR003591 | - | |
Tsu02g01152 | 914 | SMART | LRR_typ_2 | 86 | 108 | IPR003591 | - | |
Tsu02g01152 | 914 | SMART | LRR_typ_2 | 182 | 206 | IPR003591 | - | |
Tsu02g01152 | 914 | SMART | LRR_typ_2 | 109 | 132 | IPR003591 | - | |
Tsu02g01152 | 914 | Gene3D | Ribonuclease Inhibitor | 22 | 319 | IPR032675 | - | |
Tsu02g01152 | 914 | Gene3D | Phosphorylase Kinase; domain 1 | 535 | 645 | - | - | |
Tsu02g01152 | 914 | SUPERFAMILY | Protein kinase-like (PK-like) | 556 | 858 | IPR011009 | - | |
Tsu02g01152 | 914 | Gene3D | Transferase(Phosphotransferase) domain 1 | 646 | 860 | - | - | |
Tsu02g01152 | 914 | MobiDBLite | consensus disorder prediction | 890 | 914 | - | - | |
Tsu02g01152 | 914 | Pfam | Leucine rich repeat | 365 | 424 | IPR001611 | GO:0005515 | |
Tsu02g01152 | 914 | Pfam | Protein kinase domain | 569 | 841 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01152 | 914 | PANTHER | OSJNBA0070M12.3 PROTEIN | 12 | 899 | - | - | |
Tsu02g01152 | 914 | SMART | serkin_6 | 568 | 848 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01152 | 914 | ProSitePatterns | Protein kinases ATP-binding region signature. | 574 | 596 | IPR017441 | GO:0005524 | |
Tsu02g01152 | 914 | ProSiteProfiles | Protein kinase domain profile. | 568 | 848 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01152 | 914 | Pfam | Leucine rich repeat N-terminal domain | 23 | 53 | IPR013210 | - | |
Tsu02g01152 | 914 | Pfam | Leucine rich repeat N-terminal domain | 330 | 361 | IPR013210 | - | |
Tsu02g01152 | 914 | MobiDBLite | consensus disorder prediction | 890 | 905 | - | - | |
Tsu02g01152 | 914 | Gene3D | Ribonuclease Inhibitor | 325 | 448 | IPR032675 | - | |
Tsu02g01152 | 914 | SUPERFAMILY | L domain-like | 36 | 449 | - | - | |
Tsu02g01152 | 914 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 693 | 705 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g01152 | Tsu-Chr2 | 9526002 | 9529558 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g01152 | 68 | 875 | Receptor kinase-like Gene Family | AT1G55610 | 30.056 | 4.86e-85 | 294 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Tsu02g01152 | Pkinase | 4.9e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g01152 | - | - | gmx:100286794 | 1127.46 |