Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01140 ATGGAAACTGCTCCGCTCTCATCGGCCACCGCTGCCGGAAACGGAGGAGGTCCGGCTCCGTTTCTTCAGAAAACGTATGACATGGTGAACGATCCCAGCACAGACGAGATCGTTTCGTGGAGCTCTACCAATAACAGCTTCGTCGTTTGGAATCCTCCTGAATTCGCTTGCGTTCTTCTTCCAACCTATTTCAAGCACAATAATTTCTCCAGCTTCATTCGTCAGCTAAATACTTATGGATTTCGAAAAACACATGCTGAGCGTTGGGAGTTTGCTAATGATGATTTTATAAAAGATCAAAAGCATCTTCTGAAGAATATACATCGCAGGAAACCTATACACAGTCATAGTAATCCTCCGGGTTCTGTAGTAGATCCTGAAAGGGCGTCGTATGATGAACAAATAGAGAAACTCTCACGCGAGAAAAGTTCTCTTGAATCCAATCTCTTAAACTACAAACACCATCAGTCAAAAACAAAGCTTCACCTGGATGAATTTCAGCAGCGTTTGGATGGTATTGAGAACAGGCAAAAAAATTTGCTGAACTACTTTGAAAAGGCTCTTCAGAATCCTTCTTTTGTTGATCAACTTTTGCGCAAAATCGAGTTCATGGATTTGGCGGCATTAAATAAGAAAAGGAGATTGCCTGAGGTTGAGCACGTGCAGCCTGTTGCCGAAGGTAGCTTGGTTGACAATCATAGCAATGTTAGACCGGAATTTGGAAATGTTTTCCAACAAGATTTCTCAAACAAACTCAGACTGGAATTGTCACCAGCTGTCTCAGATATGAACTTGGTATCAGGTAGCACACAGGGTTCAAATGAAGATGAGGAAATGCCACAGAAGAACCTTTCTGATGGAGAACTAAAAGGAACGCAGACAAGAACTGGCCTTGCTTTTGCACCTGAAACAGTAGATCTTGCAGATACTGGCACGTCTTTTACTTTTAACATGGATTCCTGTTTATCACGAAGAGCAACAACTACCGAGAGTCCGAATCTTCACTCTATGGAGCCAAGTAGTGAAGAAGGTGATAGTCATATATCCTGCCAACTGAATTTAACTTTGGCATCTTGTCCATTGGAATTCAACAGGAATTCATACTCAGCCCGATCACCCCAAATAGACTGTCAAGAAATTGGCAATTTGGCAGAATCAAGAGTTACCGCCAATGGTAAAGAATCTGAAAGTGGAGTTTCCTTAAACCGAATTGTGGCTAACGGGGCTATCAAGTTAGCTTCACCGAAGGAGGCTTCAGGTAACGGCCAAGTCAAACCAGCTGCTCCACATGCAGTGAATGATGTGTTTTGGGAACAGTTCCTCACTGAAAGACCAGGCTGTTCAGACAATGAAGAAGCAATATCCAACTATCGAGCAAATCCATATGACGAGCAAGAGGAAGGGCGGGCAGTTCATGGTATCTCCAATAACATCAAGAATATGGACAATCTCACACTTTGA 1461 0.4292 METAPLSSATAAGNGGGPAPFLQKTYDMVNDPSTDEIVSWSSTNNSFVVWNPPEFACVLLPTYFKHNNFSSFIRQLNTYGFRKTHAERWEFANDDFIKDQKHLLKNIHRRKPIHSHSNPPGSVVDPERASYDEQIEKLSREKSSLESNLLNYKHHQSKTKLHLDEFQQRLDGIENRQKNLLNYFEKALQNPSFVDQLLRKIEFMDLAALNKKRRLPEVEHVQPVAEGSLVDNHSNVRPEFGNVFQQDFSNKLRLELSPAVSDMNLVSGSTQGSNEDEEMPQKNLSDGELKGTQTRTGLAFAPETVDLADTGTSFTFNMDSCLSRRATTTESPNLHSMEPSSEEGDSHISCQLNLTLASCPLEFNRNSYSARSPQIDCQEIGNLAESRVTANGKESESGVSLNRIVANGAIKLASPKEASGNGQVKPAAPHAVNDVFWEQFLTERPGCSDNEEAISNYRANPYDEQEEGRAVHGISNNIKNMDNLTL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01140 486 MobiDBLite consensus disorder prediction 108 130 - -
Tsu02g01140 486 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01140 486 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01140 486 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01140 486 MobiDBLite consensus disorder prediction 266 289 - -
Tsu02g01140 486 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 482 IPR027725 -
Tsu02g01140 486 MobiDBLite consensus disorder prediction 325 346 - -
Tsu02g01140 486 SUPERFAMILY "Winged helix" DNA-binding domain 17 110 IPR036390 -
Tsu02g01140 486 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01140 486 Gene3D - 16 111 IPR036388 -
Tsu02g01140 486 Coils Coil 128 155 - -
Tsu02g01140 486 Coils Coil 163 183 - -
Tsu02g01140 486 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01140 486 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 13 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01140 Tsu-Chr2 9455866 9459333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01140 21 486 HSF AT4G13980 53.602 1.01e-157 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tsu02g01140 HSF_DNA-bind 1.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01140 K09419 - gmx:100786408 728.398