Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01114 ATGCAAGCAAATGAGACCTTATTCTTGTCATTAAAATTTGATAATGCATCATTAGAACCTAGAACCTTAATCTTCACTGTTTGTTCTGCCGCTCCGCCAAATATTGTTTCAGATGGATTATGGggtggacaaaaaaatggaaGGGTTCCAATGAAGTCTGCACTTCCTATGTTTGAGATGCAGGTTCTTGTGATTTTTACTATCACACAAATCTTCAATTTATTCCTACAACGTTTGGATTTCCCTCAATTTATTGGACAAATGATGGCTGGCCTAATTTTAGGTCCTTCAATTCATCTAGAAAAAATCGACAAATACAAGAAGATGTTGTTTCCATTTGGAAGTCAAGACACACTTGCAACAATAACATCAATTGGTTATGCACTCTTCATTTTTATCAATGCTGTGCAAATGGATTTGAGCATGGTAACAAGGACAGGACACAAGGCTTGGACCATTGCTGTCATGGGATTGGCTACGCCTTTACTCGTTTGTCTTTTGCTTCCACACTACCTTGTTAAAAGTATTGATGGTAAAGCAAATGAAAGTTTTCCTAGTGTGGTGTTATCACATACCGTAACTTCATTTGCAGTCATTGCTTCGCTCCTCAACGAACTTAAAATCCTTAACTCTGAACTTGGAAGGTTGGCATTATCCTCAGTGTTGGTGAGTGACATATTAGGAACAACTATCGGATGTATTTTTAATGTCGCAAAGTATTCAAATAAATTCATCGATGTCATAAAACTTGGGATGCCATTGTTAGCTTTTGTTATCTTTGTTCCGTTGATTCTTCGGCCGTTAATGTTTTGGATCATCAAACATACTAAAGAAGAAAGGCCTGTGGATGATGGTTACATCTATGCTATCATTGTACTGGTATTTGGTTTAGGTTGGATTTCAGTTCGCATGAACCAAGAGTTCATCTTAGGTGCATTTGTTTTGGGGTTGGCTGTGCCAGAAGGACCTCCATTAGGATCTGCATTGGTTAAGAAGCTTCAATTCTTTGGTACAAGTGTATTTCTGCCTATATTTGTGACTTGTGGTGTGATGAAGGCAGATTTGTCTTTGCCAAAAACACCAACAGCAATTTTTACTACTGGTGGTGCCATTTTCATTACACACATGATCAAAATAATAGCATACCTTATACCATCCCTCATTTGCAAGATCCCCTTGAAAGATGCCTTGGCTCTTGCCTTCATTTTGAATGCCAAAGGTGTAGTGGATGTTGGCACATTTTCTGGCTCATATGATGGAAAGCTTTTTAGGGACGAAGCTTATGGAGTGATGATTGTCAGCATTATTATCATAGCATGCCTAGTAAAATGGTCAGTGAAGATATTGTATGACCCATCAAGAAAATATGCCGGCTACCAGAAAAGGAACATCATGAGTTTAAAACCGGATGCAGAACTGAGACTACTTGCATGCATTCACAAGCAATACAACATATCAGCTATAACAGATGCCATTGACATTTGTTCTCCAACAACAGAACAACCTATCATTGTGGATGCATTACATCTTATTGAACTAGTTGGAAGGACGTCCCCCATTTTCATCTCCCATCGTCTTCAAAAAGCGGATTCTTGTTCCCACAAGTCTTACTCAGATGATGTCATTCTAGCTCTTGACCTCTATGAACATGAAAACTATGGTGCAGTAACTACACATGCTTACACAGCCATATCTCCACCTGCCCTTATGCATGAAGACGTTTGTCAACTTGCATTGGACAAAGTTGCATCCATCGTGATTCTTCCTTTCCACATAAGATGGACTGTGGATGGTGGCGTTGAATCTGATGACAAGAACATAAGGTCCTTAAATTGCAAGGTACTAGAAGTATCTCCATGCACTGTAGGAATCCTTGTCACTCGTTCTTTGTTACAAAACAACTCATCCATTAAGCTAGCAGTGATTTATCTCGGTGGAAGAGATGACCGAGAGGCTCTATGCTTAGCTAAAAGAGCGATAAGGAACCCAAAAATCAACTTGGTTGTGTACCACCTTACAGTTGAGCAAAACGTCCCAAGCTTGGAATATCTACTAGATAATGAGGCACTAGAAGAATTACAGAAACTACCACAATGTGGCTCGGAAAATGTTCATTACCAAAAAGTGATTGTGAATGATGGTCCAGGGACATCTTCTGTTCTTCGCGATATAGCGAATGAACATGATTTTTTCATTGTTGGGAGAACACATGAGTCAGACTTACCTCAGATAGAAGGGCTAAAAGATTGGAGTGAATATTCAGAGTTAGGCGTCATTGGTGATTTGCTTGCTTCACCGGATTTTGAGAGCCGAGCTGGTGTTTTGGTAGTGCAGCAACAAGTCAAAGACAGATAG 2355 0.3924 MQANETLFLSLKFDNASLEPRTLIFTVCSAAPPNIVSDGLWGGQKNGRVPMKSALPMFEMQVLVIFTITQIFNLFLQRLDFPQFIGQMMAGLILGPSIHLEKIDKYKKMLFPFGSQDTLATITSIGYALFIFINAVQMDLSMVTRTGHKAWTIAVMGLATPLLVCLLLPHYLVKSIDGKANESFPSVVLSHTVTSFAVIASLLNELKILNSELGRLALSSVLVSDILGTTIGCIFNVAKYSNKFIDVIKLGMPLLAFVIFVPLILRPLMFWIIKHTKEERPVDDGYIYAIIVLVFGLGWISVRMNQEFILGAFVLGLAVPEGPPLGSALVKKLQFFGTSVFLPIFVTCGVMKADLSLPKTPTAIFTTGGAIFITHMIKIIAYLIPSLICKIPLKDALALAFILNAKGVVDVGTFSGSYDGKLFRDEAYGVMIVSIIIIACLVKWSVKILYDPSRKYAGYQKRNIMSLKPDAELRLLACIHKQYNISAITDAIDICSPTTEQPIIVDALHLIELVGRTSPIFISHRLQKADSCSHKSYSDDVILALDLYEHENYGAVTTHAYTAISPPALMHEDVCQLALDKVASIVILPFHIRWTVDGGVESDDKNIRSLNCKVLEVSPCTVGILVTRSLLQNNSSIKLAVIYLGGRDDREALCLAKRAIRNPKINLVVYHLTVEQNVPSLEYLLDNEALEELQKLPQCGSENVHYQKVIVNDGPGTSSVLRDIANEHDFFIVGRTHESDLPQIEGLKDWSEYSELGVIGDLLASPDFESRAGVLVVQQQVKDR 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01114 784 Pfam Sodium/hydrogen exchanger family 63 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu02g01114 784 Gene3D - 57 457 IPR038770 -
Tsu02g01114 784 PANTHER CATION/H + ANTIPORTER 17 783 - -
Tsu02g01114 784 PANTHER EXCHANGER, PUTATIVE-RELATED 17 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01114 Tsu-Chr2 9230851 9234127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01114 27 777 Antiporter Super Family AT3G44900 36.512 2.54e-160 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01114 - - mtr:MTR_8g085260 1065.45