Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01085 ATGGATTTTCAAGTCGTCGTTCTCGCCGGCGGCGTCTCCAAAAAACTCGTCCCTCTCGTTTCAAAGGAACTTCCGAATGCTTTACTTCCGGTTGCAAATCGTCCGGTTCTCTCTTACGTTGTTGAGCTTTTGGAGCTTAGTAACCTTAAAGATCTCATTGTGGTTGTTGAAGGTAAAGATGTTGCTCTTAATGTTGGTGCTTGGATTTCAGGAGCTTATGCTGATCGTCTCCATGTCGAGGTTGCTTCAGTTCCGGAGGATGTGGGAACAGCTGGTGCAATTCGAGCAATTGCACACCACCTAACCGCGAAAGACATTTTGATTGTCAGCGGTGATCTTGTTTCCGATGTGCCGGTTGGTGCTGTTGCGGCTACGCATCGACGACATGATGCGGTTGTCACTGCTTTGCTCTGTAATGCTCCTATAAGTGGACCTTTGGAGTCGGTGTCTTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTGATAGGGTTGGACCCTACGAAACAGTTTTTACTTCACATAGCTACCGGAGCTGAAGTTGAAAAAGATCTTCGAGTTCAGAAGAGCATACTTCGTGCCGCTGGCcagATAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTCTACTAGAAGTTCTAGATCAGAAGTCTGCGTTTCAAAGCTTAAAGCATGATGTATTGCCATATCTTGTCCGCAGCCAACTGAAATCAGAAGTATTATTAAATGGTACACCACAAGCAGAAGAAAATGGAACTGAGAAGGTTAATTCTCAAAGCAATCAACAAATGGTATCTCAAATACTTGCTAATGCATCTGAGCCTACCTTTCATCGACGACATACACTTGGTACTATTGGTTCTGATTCTGTTCGAAGAGCCCATAAATGTTGTGTCTATATTGCTGGGAGCAGCAAGTACTGTGCTCGCCTGAATTCTATACAAGCATACAATGATATAAACCGAGatGTGATAGGAGAAGCTAATCATTTGTCAGGGTATTCCTTCTCTGCTCATAACAACATTATCCATCCTACTGCAGAGCTTGGGGCAAAAACAACTgTAGGACCACATTGTATGCTTGGGGAAGGCTCACAGATGGGTGACAAGTGCAGTGTAAAACGGTCTGTCATTGGCCGCCACTGTAGGATAGGTGCCAATGTTAAGGTTGTTAATTCCGTAGTTATGAACCATGTTACTATTGGTGACTTTTGTTCAATCCAAGGTTCTGTCATTTGCAGCAATGTACAGCTCCAAGAACGTGCCATACTAAAAGATTGTCAAGTTGGAGCAGGTTTCGTGGTCACTTCTGGTAGTGACCACAAAGGAGAGGTATTGGCTAAGAAATGA 1380 0.4377 MDFQVVVLAGGVSKKLVPLVSKELPNALLPVANRPVLSYVVELLELSNLKDLIVVVEGKDVALNVGAWISGAYADRLHVEVASVPEDVGTAGAIRAIAHHLTAKDILIVSGDLVSDVPVGAVAATHRRHDAVVTALLCNAPISGPLESVSSGGKDKTKKPGRYDLIGLDPTKQFLLHIATGAEVEKDLRVQKSILRAAGQIEIRADLMDAHLYAFKRSVLLEVLDQKSAFQSLKHDVLPYLVRSQLKSEVLLNGTPQAEENGTEKVNSQSNQQMVSQILANASEPTFHRRHTLGTIGSDSVRRAHKCCVYIAGSSKYCARLNSIQAYNDINRDVIGEANHLSGYSFSAHNNIIHPTAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGDFCSIQGSVICSNVQLQERAILKDCQVGAGFVVTSGSDHKGEVLAKK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01085 459 CDD LbH_eIF2B_gamma_C 370 449 - -
Tsu02g01085 459 Pfam Nucleotidyl transferase 6 137 IPR005835 GO:0009058|GO:0016779
Tsu02g01085 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Tsu02g01085 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 348 IPR029044 -
Tsu02g01085 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 459 - -
Tsu02g01085 459 CDD eIF-2B_gamma_N 3 220 - -
Tsu02g01085 459 Gene3D Hexapeptide repeat proteins 349 455 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01085 3 449 Eukaryotic Initiation Factors Gene Family AT4G18300 22.107 3.17e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01085 K03241 - gmx:100783346 791.571