Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01066 ATGGCAACTTCAGTCAAACCTCCATACAAAATTAAGCCAAAGGGAAAACATTATTATACAATATGGAAAACATTGTTTGAGATTGATATGAAGTATGTTCCAATCAAGCCTATTGGTCGAGGATCGTATGGCGTGGTGTGTTCATCCATCAATAAGGATACTAATGAGAAAGTTGCAATTAAGAAGATTAGcaatatatttgataattgtGTTGATTCAGTGAGAACTTTGAGGGAGTTGATGCTACTTCGACATATTCAACACGAGAATGTGATCGCTTTGAAAGATGTTATGATGCCGGTACAAAGAACAAGTTTTAAGGATGTTTACTTGGTTTATGAACTCATGGACACAGATCTTGATCGGATTATCCAGTCATCTCATCCACTTTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTACTCCGAGGTCTGAAATATCTCCACTCTGCAAATATTCTTCACCGAGACTTGAAGCCCGGCAATCTGCTCGTCAATAGCAATTGTGATTTGAAGATATGCGACTTTGGATTTGCCCGAACCAATGGACTTGATGGTGAGTTTATGACCGAGTATGTTGTCACGCGCTGGTATCGTGCTCCCGAGCTTCTATTATGTTGTGACTATTACGGAACATCCATCGATATGTGGTCCGTAGGATGCATTTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCCGGAACTGATTGCCTGAACCAACTAAAACTAATTGTAAACATTCTTGGGACCCCGCACGAGTCTGATCTCGAGTTTATTGATAATCCAAAAGCCAAATGGTATATCAAATCACTTCCCTATACAAGGGGAATACATTTCTCCCAGCTATTCCCACAAGCAGATCCGTTAGCCATAGATTTGTTGCAAAAAATGCTTGTGCTTGATCCAACTGAAAGAATTACTGCCTCAGAAGCACTCCAACATCCATATATGTCTGATTTATATGATCCAAGGTGTAACCCTCCTGCTCGAGTCCCTATCGATCTTAACATAGATGAAAATTTGGGTGAACATATGATTAGAGAAATGATGTGGAATGAGATTCTACATTACCATCCTGAAGCTGCTTCTGTCAATGCATAG 1107 0.393 MATSVKPPYKIKPKGKHYYTIWKTLFEIDMKYVPIKPIGRGSYGVVCSSINKDTNEKVAIKKISNIFDNCVDSVRTLRELMLLRHIQHENVIALKDVMMPVQRTSFKDVYLVYELMDTDLDRIIQSSHPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNSNCDLKICDFGFARTNGLDGEFMTEYVVTRWYRAPELLLCCDYYGTSIDMWSVGCIFAEILGRKPIFPGTDCLNQLKLIVNILGTPHESDLEFIDNPKAKWYIKSLPYTRGIHFSQLFPQADPLAIDLLQKMLVLDPTERITASEALQHPYMSDLYDPRCNPPARVPIDLNIDENLGEHMIREMMWNEILHYHPEAASVNA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01066 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Tsu02g01066 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01066 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu02g01066 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Tsu02g01066 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Tsu02g01066 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01066 368 Gene3D Phosphorylase Kinase; domain 1 19 354 - -
Tsu02g01066 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Tsu02g01066 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Tsu02g01066 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01066 368 SUPERFAMILY Protein kinase-like (PK-like) 27 326 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01066 Tsu-Chr2 8839315 8840726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01066 1 368 MAP Kinase Gene Family AT2G18170 76.359 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu02g01066 Pkinase 1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01066 K20537 - gmx:100783422 655.981