Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01065 ATGACGATGATGGCCGCAAGCGTGTTTGTTAGGTCGGCAAAAGATAAGCGATTTGAAGAGATGACTTTAACAGTCGACCAGACAACTCGAGAGAGTTTTGACAAGATCAACAAACAACTCGAGAAAGTGATGCGTGTTGCTGAGACTGATGACAAGGTCCCTAAGCTTTACATTAAGGCTGTTGTCTTGTTGGAAGATTTCTTGGCTCAGGCTTTGTCAAAGGATGATGCTGGTGATGGACCTTGGGACCAAAAGCTTAGCAAGAAAGATAGACTTTTGGATAGACAGTTCATGAAAGACCTTAGGGAGGTCACATGGGATATTGTTAACAAGAAGTTTAAAGAGATTGTGGCAGCTAGGTTCATTCCTTTTGTTGCAGTAGTTTTCTGTGTGACCCAGAGTtccacaaacaaaacaaaaattgtccACCGCTGCTACTTGATCACTTCAAAACTCCATTCTTTTTTCAGAGACTCTTGA 480 0.4021 MTMMAASVFVRSAKDKRFEEMTLTVDQTTRESFDKINKQLEKVMRVAETDDKVPKLYIKAVVLLEDFLAQALSKDDAGDGPWDQKLSKKDRLLDRQFMKDLREVTWDIVNKKFKEIVAARFIPFVAVVFCVTQSSTNKTKIVHRCYLITSKLHSFFRDS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01065 159 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 79 121 - -
Tsu02g01065 159 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 9 77 - -
Tsu02g01065 159 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 79 121 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Tsu02g01065 159 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 9 77 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Tsu02g01065 159 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 10 74 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01065 Tsu-Chr2 8825064 8825543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01065 10 77 Eukaryotic Initiation Factors Gene Family AT3G56150 55.696 1.53e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01065 K03252 - egr:104446372 93.9745