Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01059 ATGACTGGAGTTAGTCCTCATAATAACTGCCTTAACATCAATTCCTTTTCTCTTCCGTACCAAAACGTCTCATTCTTTTCCGATCCTAATGTTTATGAATCTATAGTGGTTATGAGATGCGAAAAACCGGTAGAGTTTGTCAACAACTACAGGAGTATTTCTGAGGAGTGTGGTGGTGGAATTGATGGTAAGGAAAAACAATTCTATTCATATGTTATGGAGATTGACGATGAAAGTCTGAGTGTGACACACATAGCAGAGTCGTGCAGAATAGAGATGAAGGTAATGATGAGTAGTTGGGATGAAAAAGTGATATGTAATGATAAGAGGAAGTGTGGGTATACAGAGGAGGTTCACACTGAGTATCTCAATGGAATTGAACTTCGTTGGCGACCAATGCGGTGTGGGAAGCAGCAAGACAGAGACAATCACGGGGAAGGAACAAGGAAACCACTACGATCGCCACTTCGCTGCATGATCCGCCATACAATACACACCTGCAGTCGAATGCTAAGTTACACGCTGTCCCTATGGATTGTTGGAAAATATGTTCTTGGATCACCCTTTGTGGGTGTGGTCTTGATATGTAGATGGAGAAAAAAGCATCAATCCATATATGACACAGTTGAAGATTTTATCCAAAGTCACAACAATTTCATGCCCATCAGATACTCCTACTCTCAAATCAAAACAATGACCAAAAGTTTCAAGGATAAGTTGGGTGAAGGAGGCTATGGTTCTGTCTATGAAGGAGAGCTTCGAAGCAAACGCAAAGTAGCTGTTAAGGTATTGACTAAATCTCAAACCAATGGGCAAGACTTCATCAATGAAGTTGCAACAATCGGAAGAATCCGTCATGTCAATGTGGTGCAGCTAATTGGATTTTGTGCCGAAAGAACAAAGCAAGCTCTGATCTACGAGTTCATGCCTAATGGTTCTCTTGATAAATACACATTTTCACAAGACCAAGGAAACTCATCCTCATTAAGCTACGATAAAATCTATGACATTGCTCTTGGAATTGCTCGTGGAATTCAATACTTACACCAAGGTTGTGACATGCAAATCATACATTTTGATATAAAACCTCATAACATTCTTCTTGATGAGAATCTCAACCCGAAGATATCCGACTTTGGTTTGGCGAAGTTATACCGAATAGATCAAAGCATTTTGACTTTAACAGCAGCAAGAGGAACGATGGGGTACATGGCTCCTGAGTTGCTGTACAAGAACATTGGAAACCTCTCTCACAAAGCTGATGTTTATAGTTTTGGAATGATGTTAATGGAAATGGCAGGaagaaaaaagaacacaaaTTATATAGAGAATTGTTGGCAAGACTATTTTGCTAAATGGATTTATGATCAATTTGAGGAAACCATAAATACAAACAATGGAACAGAGGAGGAAAAGAAAATTGCAATGAAGATGATTGTGATTGCGTTGAAATGCATACAAATGAAACCAGATGATCGTCCTTCAATGAATAAAGTGATAGATATGCTTGAACGAGATGAAGTGCCTCAACACCTTCCACCTGGTCCTGAATCTCTCCAAACATGGCAAAGTATGTCAACTGATGCAAATGAATTCAACGACAACTAG 1608 0.3905 MTGVSPHNNCLNINSFSLPYQNVSFFSDPNVYESIVVMRCEKPVEFVNNYRSISEECGGGIDGKEKQFYSYVMEIDDESLSVTHIAESCRIEMKVMMSSWDEKVICNDKRKCGYTEEVHTEYLNGIELRWRPMRCGKQQDRDNHGEGTRKPLRSPLRCMIRHTIHTCSRMLSYTLSLWIVGKYVLGSPFVGVVLICRWRKKHQSIYDTVEDFIQSHNNFMPIRYSYSQIKTMTKSFKDKLGEGGYGSVYEGELRSKRKVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVQLIGFCAERTKQALIYEFMPNGSLDKYTFSQDQGNSSSLSYDKIYDIALGIARGIQYLHQGCDMQIIHFDIKPHNILLDENLNPKISDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGNLSHKADVYSFGMMLMEMAGRKKNTNYIENCWQDYFAKWIYDQFEETINTNNGTEEEKKIAMKMIVIALKCIQMKPDDRPSMNKVIDMLERDEVPQHLPPGPESLQTWQSMSTDANEFNDN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01059 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Tsu02g01059 535 Pfam Protein kinase domain 237 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01059 535 Gene3D Phosphorylase Kinase; domain 1 208 308 - -
Tsu02g01059 535 MobiDBLite consensus disorder prediction 516 535 - -
Tsu02g01059 535 Gene3D Transferase(Phosphotransferase) domain 1 309 511 - -
Tsu02g01059 535 ProSiteProfiles Protein kinase domain profile. 234 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01059 535 PANTHER RUST RESISTANCE KINASE LR10-RELATED 44 516 IPR045874 GO:0004672
Tsu02g01059 535 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 44 516 - -
Tsu02g01059 535 SMART serkin_6 234 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01059 535 MobiDBLite consensus disorder prediction 508 535 - -
Tsu02g01059 535 ProSitePatterns Protein kinases ATP-binding region signature. 240 262 IPR017441 GO:0005524
Tsu02g01059 535 SUPERFAMILY Protein kinase-like (PK-like) 213 504 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01059 Tsu-Chr2 8786473 8789702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01059 223 516 Receptor kinase-like Gene Family AT5G38280 52.475 5.98e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu02g01059 Pkinase 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01059 - - mtr:MTR_4g073220 756.518