Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01058 ATGGCTATTTGGCTAAAAATACTCATCCATGTGTTCTTCTGCTTCTTAATTGCAGTTGCAGAAACTATTTACCCTGATAACCAATGTAAAGAATCAAGTTGTGATGGTATTAATGGACCATTCATAAGATTCCCATTCAGACTCAAAGGAAAACAACCTAAATGGTGTGGCTACAATAATTCCTGGTTTGAGTTATACTGCACAAACACCAACCAAACAGTGTTGGAACTCcctttttcttctaaaaccaTCATCAAAACCATAGACTATACTTCACAAATCATTACAGTATCTTATCCTGAATTCTGCCTTCACAAACAAATTCCTAATTTCGACATATTCTCATCTCCCTTTCGGTTCAACAATGACTTTGGACTCAAAGAATATGCTTTATTCAATTGTTCAAAGACGTCTCAGAGAAACACAGATCACATAATAACACCTGGAAACTTTTCTTGTCTAAATGTTCCGGGATTTGAAGTTATAGCAGTGAGTTGGGACTCATCAATAATCAGGACACCCTTGCTGTCCTGTACCAGAATCCAAAACCTTGTATTGTTGCCTAATTCTTTGTTTAACAACAACGTTGACGCTGGTCTCAATTGGTTAGAACCAGATTGCACAAACTGTGAACGAAAAGGCGGGCAATGCAAGGCCAAAAGAAACACATCTCAACACAAATTTGAATGTACAGTCATCGATAAAGGTCCATCAAAAGGGAAAGTGATTGCTGGTGGAATCATAGGCCCATTATCTTTGATATTTGTTGGAGTCACAGCATATTGTATCTATGTAGCTTTCATTGAAAGGAAGCATTACATAAGAATCAAAAAGTTTTTGAAGGATTATAAAGCTCTTAAGCCTTCCAGATACTCATATGGAGATATTAAAAGAATTACAAATCAGTTTAAGGAAGAACTAGGGCAAGGAGCTTTTGGTTCTGTCTTCAAAGGAAAGCTATCAAAGGAAGTTCAGGTAGCCGTTAAGGTCCTAAACACTTCAACAGGAAATGGCCAAGAGTTCATCAATGAAATGGAAGCAATGTGTCAAATTCATCACGTTAACGTGGCTCGCTTGGTTGGCTTTTGTGCAGATGGGAACAGACAAGCCTTGGTGTATGAATTTCTACCAAAAGGTTCGTTGCAGAAATTCATATCATCTGCAGACAATAAGGATGCCTTTTTAGGTTGGGAAAGGCTACAACAAATTTCTCTCGGTATAGCAAAGGGAATTGAGTATCTTCATCAAGGTTGCGATAAACGAATTCTCCATTTTGATATCAAACCTCATAATGTATTGCTAGATGACAATTTCACACCCAAAATTTCTGATTTTGGTTTGGCCAAACTTTGTTCCAAGGAAAAAAGTAAAGTGTCAATGATCACGGCTAGGGGCACTTTGGGCTACATTGCACCAGAGGTATTTTCTAGGAACTTTGGCAATGTATCCTATAAGTCAGACATTTATAGTTATGGAATGATGCTTCTTGAAATGGTTGGAGGAAGGAAAGTAACTGATGTCACGGCCGAAAACAGCAGCCAAGTTCACTATCCACAATGGATTTATAATCTTCTAGAGAACAATGAAGATATAAAAATCCAtattgaaggagaagaagacaCTAGAATTGCAAAGAAGCTATCAATTGTGGGACTTTGGTGCATTCAGTGGCATCCAGCAAATCGCCCAACCATGAAGGCTGTGGTTCAAATGCTGGAAGGAAATGGTGAGAAGTTAGAGATGCCACCTAATCCATTTGCATCTGCATTGACAACGAGAACAGGTGCTAGGCATCTGAACCTGGAACTGGATGTCATCTCAGAAATAGAGTGA 1833 0.3775 MAIWLKILIHVFFCFLIAVAETIYPDNQCKESSCDGINGPFIRFPFRLKGKQPKWCGYNNSWFELYCTNTNQTVLELPFSSKTIIKTIDYTSQIITVSYPEFCLHKQIPNFDIFSSPFRFNNDFGLKEYALFNCSKTSQRNTDHIITPGNFSCLNVPGFEVIAVSWDSSIIRTPLLSCTRIQNLVLLPNSLFNNNVDAGLNWLEPDCTNCERKGGQCKAKRNTSQHKFECTVIDKGPSKGKVIAGGIIGPLSLIFVGVTAYCIYVAFIERKHYIRIKKFLKDYKALKPSRYSYGDIKRITNQFKEELGQGAFGSVFKGKLSKEVQVAVKVLNTSTGNGQEFINEMEAMCQIHHVNVARLVGFCADGNRQALVYEFLPKGSLQKFISSADNKDAFLGWERLQQISLGIAKGIEYLHQGCDKRILHFDIKPHNVLLDDNFTPKISDFGLAKLCSKEKSKVSMITARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMMLLEMVGGRKVTDVTAENSSQVHYPQWIYNLLENNEDIKIHIEGEEDTRIAKKLSIVGLWCIQWHPANRPTMKAVVQMLEGNGEKLEMPPNPFASALTTRTGARHLNLELDVISEIE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01058 610 ProSiteProfiles Protein kinase domain profile. 301 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01058 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Tsu02g01058 610 Pfam Protein kinase domain 303 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01058 610 PANTHER RECEPTOR-LIKE KINASE 24 609 - -
Tsu02g01058 610 Gene3D Transferase(Phosphotransferase) domain 1 376 581 - -
Tsu02g01058 610 SUPERFAMILY Protein kinase-like (PK-like) 286 573 IPR011009 -
Tsu02g01058 610 SMART serkin_6 301 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01058 610 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 609 IPR045874 GO:0004672
Tsu02g01058 610 Pfam Wall-associated receptor kinase galacturonan-binding 29 98 IPR025287 GO:0030247
Tsu02g01058 610 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Tsu02g01058 610 Gene3D Phosphorylase Kinase; domain 1 265 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01058 Tsu-Chr2 8768447 8771209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01058 3 594 Receptor kinase-like Gene Family AT1G66910 37.174 6.04e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu02g01058 Pkinase 7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01058 - - mtr:MTR_4g073230 1052.35