Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01054 ATGGCGTTCACCAAGGAACGTGAGAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGCTATGAAGAAATGGTGGAAGCCATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGACAGTGGAAGAGAGAAACCTTTTATCAGTTGGGTACAAGAATGTAGTGGGTGCTCATAGGGCTTCTTGGAGGATTCTATCCTCAATTGAGCATAAGGAAGAATCTAAAGGGAATGATGTGAATGTGAAGAGGATAAAGGAGTATAGACACAAGGTGGAAACTGAGTTGTCTAATATATGCAGTGATATCATGGCTATTATTGATGATCACCTTATTCCTTCATCCTCTAATGGTGAATCGAGTGTCTTTTTCTATAAAATGAAAGGGGACTATTATCGGTATTTGGGGGAATTTAAGTCGGGTGATGAGAAAAAAGAGGCTGCTGATCTTTCCATGGAAGCATATCAGACAGCTTCTACTGCAGCTGAAGGCGAGTTACCTCCGACGCATCCCATTCGATTGGGTTTAGCTTTGAACTTCTCCGTCTTTTATTATGAAATTTTGAACTCTCCTGAAAGGGCATGTCACCTTGCTAAGCAGGCATTTGATGAAGCCATCTCTGAGTTGGATACACTGAGTGAGGAGTCTTACAAAGACAGCACATTGATTATGCAACTTCTAAGGGACAACCTCACATTGTGGACTTCTGACATCCCTGAAGATGGAGATGAAGAACAAAAGGTGGAATTTTTGCGAGGTGGTGGAGGTGAAGATGCATAG 780 0.4231 MAFTKERENFVYIAKLAEQAERYEEMVEAMKNVAKLNVELTVEERNLLSVGYKNVVGAHRASWRILSSIEHKEESKGNDVNVKRIKEYRHKVETELSNICSDIMAIIDDHLIPSSSNGESSVFFYKMKGDYYRYLGEFKSGDEKKEAADLSMEAYQTASTAAEGELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGDEEQKVEFLRGGGGEDA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01054 259 SMART 1433_4 7 248 IPR023410 -
Tsu02g01054 259 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 4 246 - -
Tsu02g01054 259 Pfam 14-3-3 protein 14 235 IPR023410 -
Tsu02g01054 259 Gene3D - 1 250 IPR036815 -
Tsu02g01054 259 Coils Coil 13 46 - -
Tsu02g01054 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Tsu02g01054 259 PIRSF 14-3-3 1 247 IPR000308 -
Tsu02g01054 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Tsu02g01054 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Tsu02g01054 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Tsu02g01054 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Tsu02g01054 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Tsu02g01054 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Tsu02g01054 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Tsu02g01054 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Tsu02g01054 259 PANTHER 14-3-3 PROTEIN 4 246 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01054 Tsu-Chr2 8747476 8751347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01054 1 259 14-3-3 family AT2G42590 77.863 1.24e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01054 K06630 - gmx:100807980 455.677