Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01048 ATGGCAGTAGTAGCAGCTCCAAAGAAAACCAACTCAATCAACAAAAAAGATAACCCAAATCTTCTCTTAGGCCGTTTCGAATTAGGTAAACTACTTGGCCATGGAACCTTCGCTAAAGTTCATCTTGCAAAGAACCTCAAAACAGGTGAATCAGTAGCAATTAAAATCATAAGCAAAGACAAAATCCTCAAAAGCGGTTTAGTTTCACACATCAAACGTGAAATCTCAATTCTTCGCCGTGTTCGACATCCTAACATAGTTCAACTTTTCGAAGTCATGGCTACAAAAACAAAGATTTACTTTGTTATGGAATATGTACGAGGTGGTGAACTTTTCAATAAGGTTGCTAAAGGTAGGTTAAAAGAAGAAGTtgcaagaaaatattttcaacaATTGATTTGTGCTGTCGGATTTTGTCATGCTAGAGGTGTTTATCATAGAGATTTAAAACCTGAAAATTTGttacttgatgaaaatggtaatcTTAAAGTTTCAGATTTTGGATTAAGTGCTGTTTCTGATGAAATTAAACAAGATGGTTTGTTTCATACTTTTTGTGGTACACCTGCTTATGTTGCTCCTGAGGTTTTATCTAGGAAAGGTTATGATGGTGCTAAGGTTGATATTTGGTCTTGtggtgttgttttgtttgttttgatggCTGGTTATTTACCTTTTCATGATCCTAATAATGTTATGGTTATGTAtaagaagatttataaaggtgAATTCAGGTGTCCGAGATGGTTTTCGCCTGAGCTTGTTAATCTTCTTACTAGGTTACTTGATATTAAGCCTCATACTAGGATTTCGATTCCGGAGATTATGGAGAATCGTTGGTTTAAGATAGGTTTTAAGAGTATTAAGTTTTATGTTGAGGATGATGTTGTTTGTAATGTTGATTCTCTTGAatttgatgatggtggtggtgatgggGATAATAAGGTAGTGAATTTCGATGATCATCGTGATGAGGTGCTGGAATCAGTATCGGATACGGAATGGGATCCTGAGGCTTTGAGTAGAAGGAATAACCGTGCTCGTGGTTTGATGCCGAGGCCTGCAAGTTTGAATGCTTTTGATATTATATCGTTTTCGCAAGGTTTTGATCTTTCGGGATTGTTTGAGGAAAAGGGTGATGAAGCAAGGTTTGTGTCTAGTGCATCAGTGCCGAAGATTCTATCGAAATTGGAGGAAGTTGCTCAGTTGGTTCAGTTCAATGTTAGGAAGAAAGATTGCAGGGTTAGCTTGGAGGGTTCTAGAGAAGGGGCAAAAGGGCCGTTGACGATTGCTGCTGAGGTATTTGAATTGACGTCTTCTTTGGTGGTGGTGGAAGTGAAGAAAAAAGGAGGAGATAAAGTAGAATATGAGAAATTCTTAAACACTGAATTGAAGCCGGCTTTGCATAGTTTAATCGTGGAGGAAGAATCTGCAGGTTCTTCAAGTCAAACTACACCAGATGAATCTTTGCAGCAACGTGCATTTTCTGATTCTGCCATTGACAAACATTCAGATAGTATTGAAGCTCTCAACTTAGATACCTGA 1545 0.3534 MAVVAAPKKTNSINKKDNPNLLLGRFELGKLLGHGTFAKVHLAKNLKTGESVAIKIISKDKILKSGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLICAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDEIKQDGLFHTFCGTPAYVAPEVLSRKGYDGAKVDIWSCGVVLFVLMAGYLPFHDPNNVMVMYKKIYKGEFRCPRWFSPELVNLLTRLLDIKPHTRISIPEIMENRWFKIGFKSIKFYVEDDVVCNVDSLEFDDGGGDGDNKVVNFDDHRDEVLESVSDTEWDPEALSRRNNRARGLMPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSASVPKILSKLEEVAQLVQFNVRKKDCRVSLEGSREGAKGPLTIAAEVFELTSSLVVVEVKKKGGDKVEYEKFLNTELKPALHSLIVEEESAGSSSQTTPDESLQQRAFSDSAIDKHSDSIEALNLDT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01048 514 Gene3D Transferase(Phosphotransferase) domain 1 16 306 - -
Tsu02g01048 514 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01048 514 MobiDBLite consensus disorder prediction 475 514 - -
Tsu02g01048 514 MobiDBLite consensus disorder prediction 498 514 - -
Tsu02g01048 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Tsu02g01048 514 CDD CIPK_C 358 468 - -
Tsu02g01048 514 MobiDBLite consensus disorder prediction 475 497 - -
Tsu02g01048 514 SUPERFAMILY Protein kinase-like (PK-like) 22 282 IPR011009 -
Tsu02g01048 514 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01048 514 CDD STKc_SnRK3 25 280 - -
Tsu02g01048 514 ProSiteProfiles NAF domain profile. 352 376 IPR018451 GO:0007165
Tsu02g01048 514 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Tsu02g01048 514 PANTHER - 8 486 - -
Tsu02g01048 514 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01048 514 Pfam NAF domain 354 410 IPR004041 GO:0007165
Tsu02g01048 514 Gene3D Kinase associated domain 1, KA1 354 474 - -
Tsu02g01048 514 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 8 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01048 Tsu-Chr2 8700204 8702090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01048 8 489 CBL-interacting serine-threonine protein kinases AT4G18700 71.399 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu02g01048 Pkinase 9.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01048 - - gmx:100786078 704.516