Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01047 ATGGAAGAATGCATATCCGATCGATTTGGATTTTGGCTCAGAATTTATGTTGGATTGATTACTCTTTCGGCAATTCGACAGTGCTGGGCGTTGAATGATGAAGGAATTGCTTTGTTGGAATTTCGAGAAAGAATAACTTCTGATCCTCATGGTGCTCTGGCGAATTGGAATCCAAATGATTCCGATCCTTGCAAGTGGTGGGGTGTTCTTTGTGTTGATGGTAAAGTTCAAATGCTGGACCTAAATGGGCTATCATTGGAAGGGGAATTAACTCCTCATCTTGGGAAACTTAGTCACTTAAAATCTCTTGTGCTATGCAAGAACAATTTTTATGGCACCATTCCCAAAGAACTTGGAGATCTAGACAATCTAGAGTTGTTAGATTTAAGGGAGAATAACTTAACTGGAAATATGCCATCAGAAATTGGCaggttgttgttgttaaaaGAATTGTTGGTTCATGACAACAAAATTGAAGGCATCAGCGATTCTCTAGAGCTTGGGAACGTGCCTTCTAAATCACTATTTATCGACAACTATTCATCACCTCTGACAAGTTTATTTCGCTGCAAGCATAGAAAGTTTGCACACTGCTTGTGGTATAGAGATCTCAAGCAATTGAACAAGGTAGATTCTTTGGCTGTTCCGTTTAAAGGAGCACTTAAAAGATACTTTAATGCCATGGCATTGCCATTGTTCAAGCTAGGAAAGGCTACCTCTGATGGCTATGAAGAGAATTACTGTGCCGACCTTCCTAGTACTGACGAGTCGGAGGTTGGCCCAAATTTATCAAATCTAATCAGTTCTGCACGTCGTAAGTTGCTTGATCAGTCCAGTAACCTTGCAGCTGCACCTTATAGTGGACCTGCTATACAGATCAGTTATCTTCCAATTACCATAAGTTGTGGATCTTTCCCAGCTGTGCCAGATGCCAATAAGATACAAAATCAGTCAGCTGCACCGCCAGATTCACCTACTGTTTCTCCACAAGATATTCAAACAAGTCTACCAAATTCATCTAGCGGTGCTCTAAGAACACTCTGGaaatatattatcattatcTTTGCTGTGGTTTTCTTGGTCCTTTTAATTGTAATCATACTTTGCATCTATCGAAAACGAGCTGCAAAAGTAATAAAGCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTGTAACAGGGGTTCCCAAGTTGAATCGATCAGAGTTGGAGACAGCCTGTGAAGATTTCAGCAATATCATTAACAGTTTTGAGAAGTGCACCGTATATAAAGGAACACTGTCCAGTGGAGTTGAGATTGCCGTTGATTCTACTATTATTTCTTCTACTGAGGAGTGGACAAAGAACATGGAAATTACCTATAAGAGAAAGATTGCTGCTCTATCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGTTACTGTGATGAAGAAGAACCATTCACAAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCTTATTCGAGCATCTACATGTTAAGGAAGTTGAACATCTTGATTGGAGTGCAAGGATGAGAATTATCATGGGCACAGCTTATTGTCTTCAGTACATGCACCATGATCTGAATCCACCTATATCTCATTCCAACCTTAATTCACTTTCTATATTATTAACAGACGACTTCGCTGCTAAGATTTCCGAGATCAGTTTCGGCAAAACTGGATTATCAAAAGCCAGCAGCACAACTGGAGACGAATCAAAGAAATCCGAGTTGCCGCCTCATCAATGTCGTGAAACTGATGTCTATAACTTTGGAGTATTGTTACTTGAAATCATTTCTGCGAAACTGTCTTACTCTGAAGAACAAGGTTACCTTGTAAACTGGGCCTCTGAGTACTTGAATGATAAGCGAAACATCGGCTGTTTGATTGATCCCACGCTCAAGTCCTTTAAAGACAATGAACTTGATGTGATATGTGAGGTCATAAAAGAATGTGTTCAATCTGATCCAAGGTTAAGACCAACAATGCAGGAAGTAACTTGTAAATTGAGAGAAGTGCTTGCTATATCGCCCGACCAAGCAGTCCCGAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCTTATCGGTGGAGGCCACTTAA 2124 0.4002 MEECISDRFGFWLRIYVGLITLSAIRQCWALNDEGIALLEFRERITSDPHGALANWNPNDSDPCKWWGVLCVDGKVQMLDLNGLSLEGELTPHLGKLSHLKSLVLCKNNFYGTIPKELGDLDNLELLDLRENNLTGNMPSEIGRLLLLKELLVHDNKIEGISDSLELGNVPSKSLFIDNYSSPLTSLFRCKHRKFAHCLWYRDLKQLNKVDSLAVPFKGALKRYFNAMALPLFKLGKATSDGYEENYCADLPSTDESEVGPNLSNLISSARRKLLDQSSNLAAAPYSGPAIQISYLPITISCGSFPAVPDANKIQNQSAAPPDSPTVSPQDIQTSLPNSSSGALRTLWKYIIIIFAVVFLVLLIVIILCIYRKRAAKVIKPWKTGISGQLQKAFVTGVPKLNRSELETACEDFSNIINSFEKCTVYKGTLSSGVEIAVDSTIISSTEEWTKNMEITYKRKIAALSRVNHKNFTNLIGYCDEEEPFTRMMVFEYAPNGSLFEHLHVKEVEHLDWSARMRIIMGTAYCLQYMHHDLNPPISHSNLNSLSILLTDDFAAKISEISFGKTGLSKASSTTGDESKKSELPPHQCRETDVYNFGVLLLEIISAKLSYSEEQGYLVNWASEYLNDKRNIGCLIDPTLKSFKDNELDVICEVIKECVQSDPRLRPTMQEVTCKLREVLAISPDQAVPRLSPLWWAELEILSVEAT 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01047 707 SUPERFAMILY L domain-like 29 171 - -
Tsu02g01047 707 Gene3D Ribonuclease Inhibitor 30 214 IPR032675 -
Tsu02g01047 707 Gene3D Phosphorylase Kinase; domain 1 387 493 - -
Tsu02g01047 707 SMART serkin_6 348 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01047 707 PANTHER PROTEIN MALE DISCOVERER 2 7 707 - -
Tsu02g01047 707 PANTHER LRR RECEPTOR-LIKE KINASE 7 707 - -
Tsu02g01047 707 Pfam Protein tyrosine and serine/threonine kinase 423 675 IPR001245 GO:0004672|GO:0006468
Tsu02g01047 707 Gene3D Transferase(Phosphotransferase) domain 1 494 687 - -
Tsu02g01047 707 SUPERFAMILY Protein kinase-like (PK-like) 396 674 IPR011009 -
Tsu02g01047 707 MobiDBLite consensus disorder prediction 314 339 - -
Tsu02g01047 707 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Tsu02g01047 707 MobiDBLite consensus disorder prediction 567 586 - -
Tsu02g01047 707 ProSiteProfiles Protein kinase domain profile. 411 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01047 Tsu-Chr2 8693843 8698618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01047 86 687 Receptor kinase-like Gene Family AT5G56040 27.231 1.91e-46 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tsu02g01047 PK_Tyr_Ser-Thr 2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01047 - - gmx:100808098 932.169