Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01025 ATGAAAAGTAGTAAATTCAAAAACATATCATATACTGATGATCAACAAGAAGACACTGACACATCTCAAGATTCACCTCCTTCTTCCACCTCATTTAACATCGATGCCTCACTCACTTCTatctcttcttcatcatcatctaagAAAAGcAGGCGAGCCATACAAAAAAGGGTGGTGCAAATCCCAATCAAGGAACCTCAAGGATCAAGACTTAAAGGAGAGAGCAATACTCCGCCGTCTGATTCATGGGCATGGAGAAAATATGGTCAGAAACCTATCAAAGGTTCCCCATATCCAAGAGCGTACTACAGATGTAGCAGTTGCAAAGGTTGTCCAGCGAGGAAACAAGTGGAGAGAAGCCGAGTGGACCCTACAATGCTCGTCATAACTTACTCCTCAGACCACAACCATTCATGGCCGGTTTCAAGAAATACTACAAGACTCTCCGTCAAGAAAACCGAAGTAGACCCGGTCGAACCGGACCAGAAATTTGCAGGCCGCTTGGTTGTGGACGATGAGTTGGGATGGTTGGGAGAGATTGACACAAGTTCTTCTGCTATTCTGGAGAGTCCAATTATGGCGGAGTTTGATGCTGACATGGCATCCATGTTGTTGCCGATGGGGGAAGAGGACGAGTTGCTATTCGCTGATCTTGGAGAATTGCCGGAGTGTTCCACGGTGTTCCGGCATGGGTTGTTTGATGCACGGCGGCAGTTAACGGCTCCGTCGTGTGGGACCACAACTTGA 747 0.4565 MKSSKFKNISYTDDQQEDTDTSQDSPPSSTSFNIDASLTSISSSSSSKKSRRAIQKRVVQIPIKEPQGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLVITYSSDHNHSWPVSRNTTRLSVKKTEVDPVEPDQKFAGRLVVDDELGWLGEIDTSSSAILESPIMAEFDADMASMLLPMGEEDELLFADLGELPECSTVFRHGLFDARRQLTAPSCGTTT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01025 248 ProSiteProfiles WRKY domain profile. 80 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g01025 248 Pfam WRKY DNA -binding domain 81 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g01025 248 Gene3D WRKY domain 69 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g01025 248 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 246 IPR044810 GO:0003700
Tsu02g01025 248 SMART WRKY_cls 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g01025 248 PANTHER OS01G0750100 PROTEIN 16 246 - -
Tsu02g01025 248 MobiDBLite consensus disorder prediction 1 87 - -
Tsu02g01025 248 MobiDBLite consensus disorder prediction 21 49 - -
Tsu02g01025 248 SUPERFAMILY WRKY DNA-binding domain 77 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01025 Tsu-Chr2 8524664 8526044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01025 13 230 WRKY Transcription Factor Family AT1G29280 54.357 2.42e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g01025 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01025 - - cam:101493438 344.739