Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g01019 | ATGCTTCATGAAAGAGAATACATCTCTATTTTCATTCTCTTCATGATATCCACTTTTTTCTTACCAACAACCTTAACAGCTGACACAGATGCTCAAATACTAATGAATTTCAAAAGTTTCTTGTCTAATGCAGATGCATTAAACAATTGGAGTAACAATTCTATTAATGTGTGCACATGGAATGGTTTAATATGCAAAAATCAAACACTTCATGGTTTGAGACTAGAAAATATGGGACTAAGTGGAACAATTAATGTAGACATACTTATGAGTTTGTCCACTTTGAGAAGTTTTAGtgtcattaataataattttgaggGTCCAATTCCTGCATTTAATAAACTTGTGGGATTAAGGGCATTGTTTTTGACTAATAATAAATTCTCTGGTGAAATTTCTGATGATGCTTTTGAAGGATTAAGAAGGCTTAGAAGAGTAGTCTTAGCAGAAAATGGATTTAAGGGTCATATTCCTAATTCTCTTGCTAAATTGCCTAGACTTAATGATGTTGATTTACATGGAAATAGCTTTGATGGTAATATACCAGAATTTCTACAAAGTGATTTCAGAGTGTTTAACTTGTCTAACAATCAATTGGAGGGTACAATACCAGAAAGCTTAAGAAATCAGGATCCAAGTTCTTTTGCAGGAAACAAAGGTCTATGTGGAAAACCTCTAAGCATCTCCTGCAACCAAAGCCAAAGccgtgaagaagaaaaagatggaGAACACAAGCCACCCCGTGTTCTTATTAGTGTTATTGTATTTGTGATTGTGCTTGTATTGGCTTCAATACTAGCACTTTTATTCATCCGTTACCGTAGAAAGAAAACTGCAGAAAAATCCAAATGGAATAAGGAAAATTCACAATCACAGTCTCAGAACACGAACTCTAGTATAGTTTCCACTAGTGAAGCCAAATCCATTACAATTGAAtccaagaaaaacaaagacGAAGATTTGAACTTCGTTAGCAGCGAAAGGGTTGAGTTTGATTTGCAAGATTTGTTAAGAGCCTCAGCTGAGGTTTTAGGAAGTGGAAGTTTTGGATCAACATACAAGGCTATGGTATTGAGTGGACCAGTAGTTGTTGTGAAAAGATTTAAGCACATGAACAAAGTTGGCAAAAAAGAGTTCTATGATCATATGAGAAGGCTTGGAAGTTTGACGCATCCTAATCTACTTCCTCTTGTTGCATTCTACTATGGAAAAGATGAGAAGCTTTTGATACATGATTTTGCAGAAAATGGTAGCTTGGCTAGTCATCTTCATGGTAAACATGGTTGCGAGTTGGATTGGCCAACACGTTTGAAGATAATAAAAGGAGTGGCTAGAGGTTTAGCTTACCTTTATAGAGAGTTTCCCGACGAAAAGCTACCACATGGACATCTAAAATCGTCGAATGTTGTGTTAGACCATTCATTTGAGCCTCGTTTAGCCGAATATGGACTGGTAGCAGTAACTGATTTAAAACATGCTCAGCAGTTCATGGTAGGTTTCAAGTCTCCAGAGGTGAGTCAAAATGAAGTGCCAAGCGAGAAGAGCGACGTATGGTGTTTAGGGATACTGATATTGGAGCTACTGACAGGGAAGTTCCCTGCAAATTATTTGAGGCATGGGAAGGGAGCAACGGAGGATTTGGCAATGTGGGTGGAATCTATAGTGAGGGAAGGGTGGAGTGGAGAAGTGTTGGATAAAAGCATTGGTGGAAGTAGGGGTGAAGAGGGTGAAATGTTGAAGTTGTTGGGGATTGGACTGAGTTGTTGTGAATGGAGTTTGGAGAATAGGTTTGGTTGGAAAGAGGCAGTGGCTAAGATTGAGGAGTTGAAGGAAAGAGATCATGTTGGTGTTGGAGTTGATCAGAGTCAGGACTCTGAATTGTCTCTTTGA | 1890 | 0.3698 | MLHEREYISIFILFMISTFFLPTTLTADTDAQILMNFKSFLSNADALNNWSNNSINVCTWNGLICKNQTLHGLRLENMGLSGTINVDILMSLSTLRSFSVINNNFEGPIPAFNKLVGLRALFLTNNKFSGEISDDAFEGLRRLRRVVLAENGFKGHIPNSLAKLPRLNDVDLHGNSFDGNIPEFLQSDFRVFNLSNNQLEGTIPESLRNQDPSSFAGNKGLCGKPLSISCNQSQSREEEKDGEHKPPRVLISVIVFVIVLVLASILALLFIRYRRKKTAEKSKWNKENSQSQSQNTNSSIVSTSEAKSITIESKKNKDEDLNFVSSERVEFDLQDLLRASAEVLGSGSFGSTYKAMVLSGPVVVVKRFKHMNKVGKKEFYDHMRRLGSLTHPNLLPLVAFYYGKDEKLLIHDFAENGSLASHLHGKHGCELDWPTRLKIIKGVARGLAYLYREFPDEKLPHGHLKSSNVVLDHSFEPRLAEYGLVAVTDLKHAQQFMVGFKSPEVSQNEVPSEKSDVWCLGILILELLTGKFPANYLRHGKGATEDLAMWVESIVREGWSGEVLDKSIGGSRGEEGEMLKLLGIGLSCCEWSLENRFGWKEAVAKIEELKERDHVGVGVDQSQDSELSL | 629 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g01019 | 629 | Gene3D | Ribonuclease Inhibitor | 28 | 137 | IPR032675 | - | |
Tsu02g01019 | 629 | SUPERFAMILY | Protein kinase-like (PK-like) | 342 | 608 | IPR011009 | - | |
Tsu02g01019 | 629 | PANTHER | LRR RECEPTOR-LIKE KINASE | 15 | 615 | - | - | |
Tsu02g01019 | 629 | ProSiteProfiles | Protein kinase domain profile. | 338 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01019 | 629 | MobiDBLite | consensus disorder prediction | 281 | 301 | - | - | |
Tsu02g01019 | 629 | ProSitePatterns | Protein kinases ATP-binding region signature. | 344 | 366 | IPR017441 | GO:0005524 | |
Tsu02g01019 | 629 | Pfam | Leucine rich repeat | 117 | 176 | IPR001611 | GO:0005515 | |
Tsu02g01019 | 629 | Pfam | Leucine rich repeat N-terminal domain | 27 | 65 | IPR013210 | - | |
Tsu02g01019 | 629 | Gene3D | Transferase(Phosphotransferase) domain 1 | 414 | 625 | - | - | |
Tsu02g01019 | 629 | SUPERFAMILY | L domain-like | 35 | 210 | - | - | |
Tsu02g01019 | 629 | Pfam | Protein kinase domain | 341 | 536 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01019 | 629 | MobiDBLite | consensus disorder prediction | 285 | 301 | - | - | |
Tsu02g01019 | 629 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 15 | 615 | - | - | |
Tsu02g01019 | 629 | Gene3D | Phosphorylase Kinase; domain 1 | 302 | 413 | - | - | |
Tsu02g01019 | 629 | Gene3D | Ribonuclease Inhibitor | 138 | 232 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g01019 | Tsu-Chr2 | 8481447 | 8483823 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g01019 | 1 | 616 | Receptor kinase-like Gene Family | AT4G31250 | 44.697 | 0.0 | 545 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Tsu02g01019 | Pkinase | 2.5e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g01019 | - | - | gmx:100803999 | 840.106 |