Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01018 ATGGGAAGCCAAGATGTGAAGTTGGTGAGCTTTTGGGTTAGTCCATTTGCTAAGAGAGTTGAGTGGGCCTTGAAACTAAAGGGTGTTGATTATGAGTATGTAGAAGAAGATATCTTCAATAAAAGCACTCTCCTTTTGGAATTGAACCCGGTTTACAAGTCGGTTCCGGTTCTTGTTCATGACCAAAAACCAATTGCAGAGTCATTCATTATCCTTGAATACATTGATGAAACATGGAAGCAATATCCACTTTTTCCTCCTCATCCTTATCAAAGAGCTTATGTTCGTTTTTGGACTAATTTTGCTGAACAAAAGCTTTTGGATGTAGCATGGGTTGCAATGTGTAGTAGTGGAGAAGAACAGGAAAAGGCTCTGAAGCTAGCCAGAGAAGCATTGGAGAAGATAGAAGAGGAGATTAAGGGGAAGAAATTCTTTGGAGGGGACAATATTGGGTACCTTGATCTTGCTCTTGGATGGATTTCTTACTGGCTTCCAGTTTGGGAGGAAGTTGGGTCTATGCAGATAATAGATCCATTGAAATGTTCAGCTATCACTGCATGGATGACAAATTTTCTAAGCCACCCTGTGATTAAGGACAGCTTGCCCCCAAGAGACAAGATGCTTGTTTACTTCCACACTCGCAGAGAGACATTGTCTGAGGCATTTCATGGCTGTCCATTTACTAAGAGATTTGAGTGGGCCTTGAAATTAAAGGGTGTCGATTATGAGTATGTAGAAAAAGACATCTTCAATAAAAGCACTCTCCTTTTGGAATTGAACCCGGTTCACAAGTCGGTTCCGGTTCTTGTTCATGCCCAAAAACCAATTGCAGAGTCATTGATTATCCTTGAATACATTGATGAAACATGGAAGCAATATCCACTTTTGCCTCACCATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTAATTTTGCTGAACAAAAGCTTTTGGATGTAGCATGGGTTGCAATGTGTAGTAGTGGAGAAGAACAGGAAAAGGCTCTGAAGCTAGCCAGAGAAGCAATGCAGAAGATAGAAGAGGAAATTAAGGGGAAGAAATTCTTTGGAGGTGACACTATTGGGTACCTTGATCTTGCTCTTGGATGGATTTCTTACTGGCTTCCAATTTGGGAGGAAGTTGGGTCTATGCAGATAATAGACCCATTGAAATGTTCAGCTATCACTGCATGGATGACAAATTTTCTCAGCCACCCTGTGATTAAGGACAACTTGCCCCCAAGAGACGAGATGCTTGCTTACTTCCACTCTCGCAAAGAGACATTGTCTGAGGCATTTCATGGCTGGTTCAAAGTTTAG 1320 0.4167 MGSQDVKLVSFWVSPFAKRVEWALKLKGVDYEYVEEDIFNKSTLLLELNPVYKSVPVLVHDQKPIAESFIILEYIDETWKQYPLFPPHPYQRAYVRFWTNFAEQKLLDVAWVAMCSSGEEQEKALKLAREALEKIEEEIKGKKFFGGDNIGYLDLALGWISYWLPVWEEVGSMQIIDPLKCSAITAWMTNFLSHPVIKDSLPPRDKMLVYFHTRRETLSEAFHGCPFTKRFEWALKLKGVDYEYVEKDIFNKSTLLLELNPVHKSVPVLVHAQKPIAESLIILEYIDETWKQYPLLPHHPYQRAHARFWANFAEQKLLDVAWVAMCSSGEEQEKALKLAREAMQKIEEEIKGKKFFGGDTIGYLDLALGWISYWLPIWEEVGSMQIIDPLKCSAITAWMTNFLSHPVIKDNLPPRDEMLAYFHSRKETLSEAFHGWFKV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01018 439 Gene3D Glutaredoxin 1 87 - -
Tsu02g01018 439 Gene3D Glutaredoxin 219 295 - -
Tsu02g01018 439 Pfam Glutathione S-transferase, N-terminal domain 224 288 IPR004045 -
Tsu02g01018 439 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Tsu02g01018 439 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Tsu02g01018 439 CDD GST_N_Tau 226 290 - -
Tsu02g01018 439 Coils Coil 118 138 - -
Tsu02g01018 439 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Tsu02g01018 439 SFLD Glutathione Transferase (cytosolic) 222 430 IPR040079 -
Tsu02g01018 439 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Tsu02g01018 439 CDD GST_C_Tau 300 422 IPR045074 GO:0004364|GO:0006749
Tsu02g01018 439 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Tsu02g01018 439 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 215 294 IPR004045 -
Tsu02g01018 439 CDD GST_N_Tau 6 79 - -
Tsu02g01018 439 Pfam Glutathione S-transferase, C-terminal domain 318 406 IPR004046 -
Tsu02g01018 439 Pfam Glutathione S-transferase, C-terminal domain 107 195 IPR004046 -
Tsu02g01018 439 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 299 422 IPR010987 -
Tsu02g01018 439 Coils Coil 329 349 - -
Tsu02g01018 439 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Tsu02g01018 439 SFLD Main.3: Omega- and Tau-like 222 430 IPR045073 -
Tsu02g01018 439 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Tsu02g01018 439 SUPERFAMILY Thioredoxin-like 222 316 IPR036249 -
Tsu02g01018 439 SUPERFAMILY GST C-terminal domain-like 288 427 IPR036282 -
Tsu02g01018 439 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 218 IPR045073 -
Tsu02g01018 439 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 222 429 IPR045073 -
Tsu02g01018 439 PANTHER GLUTATHIONE S-TRANSFERASE 1 218 - -
Tsu02g01018 439 PANTHER GLUTATHIONE S-TRANSFERASE 222 429 - -
Tsu02g01018 439 Gene3D - 296 432 - -
Tsu02g01018 439 Gene3D - 88 218 - -
Tsu02g01018 439 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 219 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01018 Tsu-Chr2 8478347 8480575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01018 224 430 Glutathione S-transferase Gene Family AT2G29420 44.444 1.02e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01018 K00799 - egt:105969932 373.244