Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01013 ATGATGAAGTGGGGTGGAAGAAAATCTTCttcagcttcttcttcttcttctaaacaTTCCTTCATCTCTCATGTATCTCCTTTTTCATGGCTAACAAAGTTCAAGCAAATGAAAATCAACTCAGACATAGAGGCAAAACCTGAAAAGTTGAAGCAGAACACCCTATCTGAAAATAGTTCATCACAATTTCCTCGTGGTAACATAGGAAAGTTTTATGGAGGTGGTGATGACGATGCTTTCTGGAGATTATCATTTGGTGAAGAGGTTACTAATGAGCAAAAGAAGAAAAGTGAAGATAAGCTTAAGTCAGTAATGTACAATTTGGACACTAAAAGACAtggaagaagaataagaagagaAGATAGAAAATTGCTGAATGAAACAAAGAGTGCAAAGGAACTTGAATACTTGAAGAGACGAAATGAGAGAAAAGCACAAAGAATTTTACAAGAGAAACTCTTGAAAATAGAGAACGCAGCAGAGGAAACTGAATTTGCATCAAGTAAATGTAAATTCTTAGAAAAAGATGAGCTTCAATTTGAATCACCAAGTACCtgcttattttcttcttctgcaGATGCCGAAAGTTCTGACCTTGGccttggaagtacaagaggAAATGGTGTGAAACAAAGTGAGGAGTTTAAAGAAAAGGGTAACAAAAAAAGGGAATCAGTTCATGTGAGCAGAGAAATCCAGAGGAGGAAACAAAAGCACAGTTCCAAGGTAAGAGTGCATTCTCCAAGGATGGCTGCAAAGGTTGAAATAGGCAAAATAAAAGCGATACAAgacaaaaagaaagcaaaactaaagatgaagaaagaagaagaagaaacagaagaagggtTAGATAGCTTTGCTGTTGTGAAGTGTTCTTTGGATCCAGAACAAGATTTTAGAGATTCAATGATTGAGATGATCAAAGAGAAACAGATAAGTCAGGCAGAAGAAATGGAAGAGCTATTAGCATgttatttgagtttgaattctaATGAATTTCATGATCTCATTATCAAAGCTTTCCGGCAGGTATGGTTATGTATGAGCCAATCTAGTTTGTGTAATAAATCAGATAAGCAATGTTGTTACTATGATTAA 1098 0.306 MMKWGGRKSSSASSSSSKHSFISHVSPFSWLTKFKQMKINSDIEAKPEKLKQNTLSENSSSQFPRGNIGKFYGGGDDDAFWRLSFGEEVTNEQKKKSEDKLKSVMYNLDTKRHGRRIRREDRKLLNETKSAKELEYLKRRNERKAQRILQEKLLKIENAAEETEFASSKCKFLEKDELQFESPSTCLFSSSADAESSDLGLGSTRGNGVKQSEEFKEKGNKKRESVHVSREIQRRKQKHSSKVRVHSPRMAAKVEIGKIKAIQDKKKAKLKMKKEEEETEEGLDSFAVVKCSLDPEQDFRDSMIEMIKEKQISQAEEMEELLACYLSLNSNEFHDLIIKAFRQVWLCMSQSSLCNKSDKQCCYYD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01013 365 MobiDBLite consensus disorder prediction 191 228 - -
Tsu02g01013 365 Coils Coil 258 280 - -
Tsu02g01013 365 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 360 - -
Tsu02g01013 365 MobiDBLite consensus disorder prediction 52 66 - -
Tsu02g01013 365 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 287 348 IPR006458 -
Tsu02g01013 365 MobiDBLite consensus disorder prediction 210 228 - -
Tsu02g01013 365 Pfam Transcriptional repressor, ovate 292 348 IPR006458 -
Tsu02g01013 365 Coils Coil 142 176 - -
Tsu02g01013 365 MobiDBLite consensus disorder prediction 45 70 - -
Tsu02g01013 365 ProSiteProfiles OVATE domain profile. 288 347 IPR006458 -
Tsu02g01013 365 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 360 IPR038933 GO:0045892
Tsu02g01013 365 MobiDBLite consensus disorder prediction 7 22 - -
Tsu02g01013 365 MobiDBLite consensus disorder prediction 191 209 - -
Tsu02g01013 365 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01013 Tsu-Chr2 8459925 8461022 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu02g01013 Ovate 9.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01013 - - mtr:MTR_8g087530 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01013 02 8459925 8461022 Tsu08g03877 08 57114186 57115187 PCT