Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01012 ATGGATGAAGCTGGGAGTTCAAGTTCCTTGCCTCCTTTTCTGGCAAAGACTTATGAGATGGTGGATGATCCTTCCTCGGATCCTATAGTTTCGTGGAGTATGAGTAACAAAAGTTTTGTTGTATGGAATCCTCCAGAATTTGCAAGGGTTTTGCTTCCTAGATTTTTTAAGCACAATAACTTCTCCAGTTTTATCAGACAGCTGAATACATATGGATTTAGGAAAGTTGATCCAGAACAATGGGAGTTTGCCAATGAAGATTTTATAAAGGGGCAACCACATCTTTTGAAGAATATTCATAGACGGAAGCCGGTTCATAGCCATTCTCTGCATAATCTTCAAGCACAAACGCCTCTATCAGAGTCTGAAAGACAAAATTTGAATGATGAAATAGAGAAGCTGAAACAAGACAGAGAACAACTTGTTACAGAGATAAAGAGATACCAACATGAGTTTCAAACATATGAGATTCAAATTCATTGCTCGAAAGATCGGTTGGAGAAGTTGGAGCAAAAGCAACAGAAGATGGTGTCTTCTGTTTCACAAGTACTTCAGAAGCCTGTGAATGCTATAAGTCTCTTGTCACTGACAGAAACCATGGATAGAAAACGAAGGTTGCCAGCGAGAAGTGGCTGCGTTGAAGATGCTATGGACACTTCTGTAGCTTTGCCCGGAGAAAATACAGAGGATTCCTCTATTTTGACATTAAACACAGAGAGATTGGATCAACTTGAGTCATCCGTGTTATTTTGGGAGACTATTGCAAAGGAAGTTGCCGACAGCCTGGTTCACACTCATTCAAACattgattttgatgaatctACAAGCTGTGCTGATAGTTTGTCTATATCTTGTCGGCAAATAGATGTTGAAGTTCGACCTAAGTCACCTGAAATTGACATGAACTCTGAACCAGCTGCTGCTGCTCCTGAGACCGTTGCATCAAAAGAACAACCAGTGGGCATCCCCACTGCTGCAACTGGGGTTAATGATGTATTTTGGGAACAGTTCTTGACAGAGGATCCTGGTGCATCAGAAGCACAGGAAGTACAATCAGAAAGAAAGGATAATAATAGCagaaaaaatgaaggaaaaccTGGTGATCACGGAAGATTTTGGTGGAATATGCGGAAAGGAAATAATCTTCCAGAACAGATTGGGAATGTTGGTCAAGTAGAGAAAATTTAG 1188 0.3965 MDEAGSSSSLPPFLAKTYEMVDDPSSDPIVSWSMSNKSFVVWNPPEFARVLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFIKGQPHLLKNIHRRKPVHSHSLHNLQAQTPLSESERQNLNDEIEKLKQDREQLVTEIKRYQHEFQTYEIQIHCSKDRLEKLEQKQQKMVSSVSQVLQKPVNAISLLSLTETMDRKRRLPARSGCVEDAMDTSVALPGENTEDSSILTLNTERLDQLESSVLFWETIAKEVADSLVHTHSNIDFDESTSCADSLSISCRQIDVEVRPKSPEIDMNSEPAAAAPETVASKEQPVGIPTAATGVNDVFWEQFLTEDPGASEAQEVQSERKDNNSRKNEGKPGDHGRFWWNMRKGNNLPEQIGNVGQVEKI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01012 395 Gene3D - 5 103 IPR036388 -
Tsu02g01012 395 MobiDBLite consensus disorder prediction 341 395 - -
Tsu02g01012 395 ProSitePatterns HSF-type DNA-binding domain signature. 52 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01012 395 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 376 IPR027725 -
Tsu02g01012 395 SMART hsfneu3 9 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01012 395 Coils Coil 117 172 - -
Tsu02g01012 395 SUPERFAMILY "Winged helix" DNA-binding domain 8 102 IPR036390 -
Tsu02g01012 395 MobiDBLite consensus disorder prediction 347 372 - -
Tsu02g01012 395 Pfam HSF-type DNA-binding 13 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01012 395 PRINTS Heat shock factor (HSF) domain signature 13 36 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01012 395 PRINTS Heat shock factor (HSF) domain signature 51 63 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01012 395 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu02g01012 395 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 2 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01012 Tsu-Chr2 8453634 8455953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01012 1 394 HSF AT4G18880 49.756 4.72e-115 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tsu02g01012 HSF_DNA-bind 2.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01012 K09419 - gmx:100798004 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01012 02 8453634 8455953 Tsu08g03876 08 57105599 57107406 PCT