Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00988 ATGCAAGGGAACAATCATTGTCCTCCTTTAACACCAAGGTCGAGATTGGAAAGACTTTTGAGAGAAAGAGAGGTAAGGAAATCAAGCCGGTATACTCAATCGACTGAGGACGGAAGAGATGAACTTTATAATGATTCATTCTTCGTAAGTGAGAACGGTAATGAGGAAGAGTTCACGGAAACGGGGTTTGCAGATGATAGGCCTCGCAAACAACGTTTGTTGGTGGTAGCTAACAGGTTGCCTGTCTCTGCTGTTAGAGAGGGTGTGGATTCATATCACCTTGAGATCAGTGTTGGTGGCCTTGTCAGTGCACTTTTAGGCAAGAAAAATGAGTTTGACACCAGATGGATTGGATGGGCTGGCGTGAATGTCCCCGATGAAGTTGGGCAGAAAGCTTTGACTAAAGCTTTAGCTGAAATGCGATGCATCCCGGTATTTCTTGACGAGGAGATAGTTAATGAGTACTATAATGGTTACTGCAATAACATCTTGTGGCCACTATTTCATTACCTTGGACTTCCACAAGAGGACAGGCTTGCTACCACGCGAAGTTTCCAAACTCAATTTGATGCTTATAAGAAGGCGAACCAAATGTTTGCTGATGTAGTGAATCAGCATTATCAGGATGGAGATGTTGTTTGGTGCCATGATTATCACCTAATGTTTCTTCCAAGATGTTTGAAAGAATACAATGACAAAATGAAAGTTGGATGGTTTCTCCATACGCCTTTTCCTTCCTCGGAAATACATAGGACTCTGCCGTCCAGATCAGAGCTGCTGAGATCTGTACTTGCCGCTGATTTGGTGGGATTCCATACTTACGATTACGCGAGGCATTTTGTTAGTGCTTGTACTCGAATTCTTGGGATAGAGGGTACGCCTGAAGGAGTAGAAGATCAAGGGAGGCTAACCCGTGTGGCTGCGTTTCCTATTGGAATTGACTCTGAAAGATTTATTCGAGCACTTGCGCTTCCTGAAGTCCAGACTCACatgaaagaattgaaagaaagatTTGCAGGCCGAAAGGTAATGTTGGGTGTTGATCGTCTTGATATGATAAAAGGAATTCCTCAAAAAATATTGGCATTTGAGAAGTTTCTTGAGGAGAATTCTCATTGGCATGATAAAGTTGTCCTGCTGCAAATTGCTGTACCTTCGAGGACAGATTGTCCTGAATATCAAAAGCTTACGAGCCAGGTACATGAAATTGTAGGACGCATCAATGGAAGATTTGGAACACTTACCGCTGTCCCAATACACCATCTGGATCGGTCACTTGACTTTCATGCATTATGTGCCCTCTATGCTGTTACTGATGTAGCACTTGTTACATCACTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCATGTCAAGCTTCCAAGAAGGGGGTTCTCATCTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCAATCTTGGTAAATCCATGGAACATCACAGAGGTTGCTGCTTCTATTGGTTATGCTTTGGATATGCCAGCCGATGAAAGAGAAAAACGGCATCAGTTTAATTTCAAGCATGTGACAACTCACACGTCACAAGAATGGGCCGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGAAGAAGACAAATTCCTCCATTACTTCCTAATAAAGTCGCAGTTGATTGTTACTCGAAATCCAATAACAGATTAATTATACTGGGTTTCAATGCCACTCTGACTGAACCAGTGGATGCTCTTGGAAGGGGTGATCAGATTAAAGAACTGGAACTAAAAGTGCACCCAGATCTGAAGGAACCTTTAAAGAAGTTATCCGATGATCCAAAGACAACAATAGTTGTTCTGAGTGGGAGTGGTAGAGCTGTCTTGGACAAAAACTTTGGCGAATATAATATGTGGTTGGCAGCCGAAAATGGGATGTTTTTGCGACTTACTTCAAGTGAATGGATGACAACTATGCCTGAAAATTTAAATATGGATTGGGTTGATAGTGTAAAGCATGTTTTTGAGTATTTTACTGAAAGAACCCCACGGTCTCATTTTGAGCTACGAGAAACTTCAATTATATGGAACTATAAATATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACGGGGCCAATATCAAATGCATCTCTTGATGTTTTCCAAGGTGGTCGATCTGTTGAGGTCCGTGCAGTTGGTGTGTCAAAGGGAGCAGCTATCGACCGTATCCTGGGAGAGATAGTTCATAACAAAGGCATGAAGGAACCAATCGATTACGTCCTATGCATTGGGCACTTTCTAGCAAagGATGAAGATGTCTATAAATTTTTTGAGCCAGAGCTCCCTACCGAATCATCTCCAATGGCAAAAGCTATGCTATCCAATTCTTCCAGGCCATCCTCGCTGCCAAGATTTTCATCCAGCAAAAGCAGCTCGAAAGCATCTCACTATAAGAAGCAACGCTCACTGTCAAATTTAGAAAGGAGAGCCATTGAGCGCACAACTAGTGATCCTTGGAGACCACCAGGCCGTGATAGAATGTCGCTATATGAGGGTTCCTCAGTTCTTGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTGTCACGAAAGAGATCAAGTGCCCGCTACCTTCTTAAAACCTCGCATGATATTGTCAATCTCTTAAGTGACCTGGCAGATCGTTCTTCATCACCACCAACTTGA 2736 0.4243 MQGNNHCPPLTPRSRLERLLREREVRKSSRYTQSTEDGRDELYNDSFFVSENGNEEEFTETGFADDRPRKQRLLVVANRLPVSAVREGVDSYHLEISVGGLVSALLGKKNEFDTRWIGWAGVNVPDEVGQKALTKALAEMRCIPVFLDEEIVNEYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQTQFDAYKKANQMFADVVNQHYQDGDVVWCHDYHLMFLPRCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGIEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALALPEVQTHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWHDKVVLLQIAVPSRTDCPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRRRQIPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDALGRGDQIKELELKVHPDLKEPLKKLSDDPKTTIVVLSGSGRAVLDKNFGEYNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSIIWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVFQGGRSVEVRAVGVSKGAAIDRILGEIVHNKGMKEPIDYVLCIGHFLAKDEDVYKFFEPELPTESSPMAKAMLSNSSRPSSLPRFSSSKSSSKASHYKKQRSLSNLERRAIERTTSDPWRPPGRDRMSLYEGSSVLDLKGDNYFSCAVSRKRSSARYLLKTSHDIVNLLSDLADRSSSPPT 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00988 911 Gene3D - 662 742 - -
Tsu02g00988 911 CDD HAD_TPP 571 790 - -
Tsu02g00988 911 MobiDBLite consensus disorder prediction 800 829 - -
Tsu02g00988 911 Pfam Trehalose-phosphatase 596 814 IPR003337 GO:0003824|GO:0005992
Tsu02g00988 911 MobiDBLite consensus disorder prediction 830 850 - -
Tsu02g00988 911 Gene3D Glycogen Phosphorylase B; 320 522 - -
Tsu02g00988 911 SUPERFAMILY HAD-like 570 758 IPR036412 -
Tsu02g00988 911 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 72 538 IPR012766 GO:0003825|GO:0005992
Tsu02g00988 911 Gene3D Glycogen Phosphorylase B; 64 319 - -
Tsu02g00988 911 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 71 541 - -
Tsu02g00988 911 MobiDBLite consensus disorder prediction 800 855 - -
Tsu02g00988 911 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 64 901 - -
Tsu02g00988 911 CDD GT20_TPS 72 538 IPR001830 GO:0003824|GO:0005992
Tsu02g00988 911 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 64 901 IPR001830 GO:0003824|GO:0005992
Tsu02g00988 911 Pfam Glycosyltransferase family 20 72 538 IPR001830 GO:0003824|GO:0005992
Tsu02g00988 911 Gene3D - 598 756 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00988 Tsu-Chr2 8258960 8264771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00988 1 909 Trehalose Biosynthesis Gene Families AT1G78580 73.795 0.0 1384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00988 K16055 - gmx:100797533 1512.66