Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00954 ATGGAGGTGATCAAGTTCATACTTTTACCAACAGTTTTAGCACTCTTTGTCCTTTTATTGCATTTCATCACAAGAATTATCAAACTCAGAAATCTTAACCTTCCTAAGGGAACCTTAGGATGGCCAATTATTGGAGAAACAATTCAGTTTTTCAAAGCAAATATTGAGGGAAAACAAATAAGGTTCATACAAGAGAGAATGAAGAAATATGATTCAAAGGTGTTCAAGACATCAATGTTTGGAGAGAATATTGCTGTGTTTTGTGGACCAGCAGGGAACAAGTTTTTGTTTAGTAATGAGAACAAGAATGTTCAAGTATGGTGGCCTAGCTCAGTGACAAATCTGTTAAGGTTTTCTATTCTTAATAAGGTTGGTGATGAAGCAAAGATAACTAGAAGGTTGCTTATGAGTTTTCTTAATCCAGAAACACTAAGAAATTACTTGCCAAAAATGGATAGGATTGCTCAGTACCATATAAACACACATTGGAAAGGGAAGGATCAAGTTGTTGTCTATCCCATAATACAGTTATACACATTTGAATTGGCTTGTTCCTTATTTTTAAGCATGGAAGATCCTATCCATGTAACAAAATTTTCATCACATTTTGAAGAATTTCTAAAAGGGATAATTGGCTTCTCCATTAACATTCCTGGAACAAGGTTTCATAAGGCAATGAAAGCTGCAGAtgaaataagaaaagaaattaaaataatcatgAAGAAAAGGAAAGTGGATTTGGAAGAGAAAAAAACATCACCTACACAAGACATTTTATCACATTTACTTGTTACACCTGACACAAGTGGAAGGTTTTTGAGTGAAATGGAGATTATGGATAACATACTACTACTTCTTTTTGCTGGACATGACACTTCTAGATCAGTGTTATCATCTGTCATGAAGTATCTTGGAAATTTGCCTGAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGCAGGAGAGTTATTGCAATGGGAGGAtgttcaaaaaatgaaatactCATGGAATGTTGCATCTGAAGTTATGAGGCTGTCGCCGCCTGTCGGTGGCGCTTACCGAAATGCTATAAAGGATGTCACCTATGCTGATTATAACATCCCTAGTGGGTGGAAGTTGCATTGGAATGTTCATACAACACACATGGATCCAACACTGTTTCCAAATCCTGAAAAATTTGATGCTACAAGGTTTGAAGGAGAAGGGCCAACACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGACAAGAGTTTGCTCGGTTAGAGATACTTGTGTTTATGCATAATATTGTGAAATGTTTCAAGTGGGATTTAGTTAATCCTGATGAGAAGTTCAAGTTTGATCCTATGCTAGAGCCTGAAAAAGGACTTCCAATTCAACTTCAACCTTCTCATTATACATCATAA 1443 0.3527 MEVIKFILLPTVLALFVLLLHFITRIIKLRNLNLPKGTLGWPIIGETIQFFKANIEGKQIRFIQERMKKYDSKVFKTSMFGENIAVFCGPAGNKFLFSNENKNVQVWWPSSVTNLLRFSILNKVGDEAKITRRLLMSFLNPETLRNYLPKMDRIAQYHINTHWKGKDQVVVYPIIQLYTFELACSLFLSMEDPIHVTKFSSHFEEFLKGIIGFSINIPGTRFHKAMKAADEIRKEIKIIMKKRKVDLEEKKTSPTQDILSHLLVTPDTSGRFLSEMEIMDNILLLLFAGHDTSRSVLSSVMKYLGNLPEVYEQVLKEQLEISQGKEAGELLQWEDVQKMKYSWNVASEVMRLSPPVGGAYRNAIKDVTYADYNIPSGWKLHWNVHTTHMDPTLFPNPEKFDATRFEGEGPTPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKCFKWDLVNPDEKFKFDPMLEPEKGLPIQLQPSHYTS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00954 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Tsu02g00954 480 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 15 466 - -
Tsu02g00954 480 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 Gene3D Cytochrome P450 23 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 SUPERFAMILY Cytochrome P450 28 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g00954 480 PANTHER CYTOCHROME P450 26 15 466 - -
Tsu02g00954 480 Pfam Cytochrome P450 35 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00954 Tsu-Chr2 7993701 8001104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00954 33 380 Cytochrome P450 AT5G36110 43.875 1.47e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00954 - - gmx:100778139 750.74