Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00948 atgaatttacaattttgtacTTTGCAGGCTGCGGCTGATGCTAAATATTATGGAAATTCAGAAGTTTATTATATGTTGAAGGCGCGTGGAGCTAAAGTGCCGAAAACCAGGAGGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCTGAATATGAACTCAATCCGTTAGAACTACAGGTTCGGAAGAGTGATGGTATTTCAACGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAAATACTTGATAAGGACAGTTATTCAAATCCTGATACCATAAATGTTTTCAAACACGAGCTCACACTATTGGAAAAGGTGCGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAACATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGCAACTTAACAGGTTATATTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGTTTGCTCTTGATATTGCTAGGGGCATGAATTATCTTCACGAATGCAAACCAGATCCTATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATTGAAGGTAGCTGGATTTGGCACTGTGAGATTTTCACTACTCTCACCTGATAAAGCATTGTTAGACCAGCCCGAGGCCAACGTGGACCCTTCAAGCTTGTACGTGGCACCAGAGATTTACAGAGGTGATCTATTTGATAGAAGTGTGGATGCGTATTCTTTTGGTCTCATTGTATACGAGATGATAGAGGGTATACCGGCCTTCCATCCCAAGCCTGTAGAGGAAGCTTTGAAACTGCTGTGTTTAGAAGGGAAGAGACCtccattcaagatcaaaacaaaaaGTTATCCTCCGGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCCATCGCCTGTTGTCAGACCAACATTTTCTCAGGTCATTATCCGGTTGGATAAAATTGTTGCGAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTTCCATGgaaataa 1029 0.3994 MNLQFCTLQAAADAKYYGNSEVYYMLKARGAKVPKTRRTPMTVANPREVPEYELNPLELQVRKSDGISTGTYQVAKWNGTKVAVKILDKDSYSNPDTINVFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVREYHAKGNLTGYIQKKGRLSPSKVLRFALDIARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKVAGFGTVRFSLLSPDKALLDQPEANVDPSSLYVAPEIYRGDLFDRSVDAYSFGLIVYEMIEGIPAFHPKPVEEALKLLCLEGKRPPFKIKTKSYPPDLKELIEECWDPSPVVRPTFSQVIIRLDKIVANCSKQGWWKDTFKLPWK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00948 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Tsu02g00948 342 ProSiteProfiles Protein kinase domain profile. 57 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00948 342 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 340 - -
Tsu02g00948 342 Pfam Protein tyrosine and serine/threonine kinase 69 318 IPR001245 GO:0004672|GO:0006468
Tsu02g00948 342 Gene3D Phosphorylase Kinase; domain 1 53 136 - -
Tsu02g00948 342 Gene3D Transferase(Phosphotransferase) domain 1 138 338 - -
Tsu02g00948 342 SMART serkin_6 61 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00948 342 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 10 340 - -
Tsu02g00948 342 PIRSF ILK 7 341 - -
Tsu02g00948 342 SUPERFAMILY Protein kinase-like (PK-like) 72 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00948 Tsu-Chr2 7908043 7914912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00948 10 341 MAP Kinase Kinase Kinase AT2G43850 75.602 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Tsu02g00948 PK_Tyr_Ser-Thr 5.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00948 - - aprc:113857978 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00948 02 7908043 7914912 Tsu02g00948 02 7908043 7914912 ECH