Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00943 atggGTAAAAAGAGCAAGAGCTTTTTCTCCTTTCGCCGTCGCTCCAAAAAACTACAACCACCACAACCTCCACCGTCTACGCTCGAAATCACCGGTGAGCCGTCCGAAAATCCAAAACCGAAGAAAAAAACCGCCGGAGCCAAATTATGGATGCGCTTCGACCGCTCCGGCAAGTCGGAGCTCGTCGAGTGGGAGAAAAACACAATCATCCGCCACTCCGCCATTCCCGCCAGAGACCTAAGAATTCTCGGTCCTGTCTTCTCTCATTCCTCCAATATCCTCGCGAGAGAGAAAGCAATGGTGGTGAATTTGGAGTTTATAAAAGCAATAGTAACAGCTGAAGAAGTTTTATTGCTTGATCCATTAAGACAAGAGGTTCTTCCATTTGTTGAACAATTGAGGCAACAACTTCCACATAAGACTCAACCTAAGCTTCTCGGTGGCGGTGACGATAATGTGCCTGAAGCTACTGATGGTTTACAATCCGAACTTCCGCTTCCGTTTGAGTTTCAAGTGTTGGAAATTGCTTTGGAAGTTGTTTGTACTTATTTGGATTCAGATGTTGCTGACCTTGAAAGAGGTGCTTATCCTGTATTGGATGAATTGGCTAGGAATGTTAGTACTAAGAATCTTGAACATGTTAGAAGCTTGAAGAGTAATCTTACTCGATTGCTAGCACGCGTGCAGAagGTACGAGATGAAATTGAACATCTATTAGATGACAATGAAGACATGGCTCAACTATATTTGACAAGAAAGTGGTTGCAAAACCAACAAGTTGAGGCTCATTTGGCAGCCACAACCCCGAACCTTTCAAGTGTTCGACGGCTTAATTCTACCAGAAGTGGAAGTCTTATCATTGGCAACGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGAAGCATACTTTATGCAATTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGATACTGAAGATTATGTCAACATCCAACTTGATAACCATAGAAATGAACTTATCCAACTGCAGTTGACATTGACCATTGCATCATTTGCTATTGCTATTGAGACTTTGATAGCCGGTGCATTTGGTATGAACATTCCATGTACATTATACAATATAAATGGAATCTTTTGGCCTGCTGTTGCGATTATGACTGCAGTTTCCGTAGTGATTTTCGTGCTTGTTTTAGCATATGCTAAATGGAAAAAGTTGTTAGGTTCGGATCTCGAATCTTCAATCTACAAAGGTATTGATCCTGCTTCTATGGCAAATTCAAAGAGCTCATCGGGTATTAGGAATTTGGTGTATACTGGTCCTGGAAAGCATGCTCATGCTCTCCTTCCTCCCAAAAGCCCATTTCCTACTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACAATTGGTTCAAAGCCTGTTAATAAGCCAAGAGAAGGAAACTCTCACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTTGATGATCTCCTAAATGAGCCAGATACACCTGTCAGAAGGGGTGGTCATAGGCGTTCGTCAAGTGATTCTTTTGCATATATCGACACTATGAATAATGCATCTAACATTGGTTATGCGGATCAtgatgagtataaatataagaaTTTCTTATCTATTCCGGCTTGGTCACCTCCAGAATTTGATCGCAACAAAGATGCTCGTCATGCATCCATGTATGCAGAAATGAATCTAGCAAAACAGAAAAACAGATCATGGGACTCTTTTTCAAATGCGAGTGGTGTTCCATCTGGCAGAGACAGTGTTGCTTTTCAGAGATCAGGATCACCAACCCCAAGTACACTATATGAAGCAGATCGGATCCTACCGACTGCAAGTGAAAATCACGATTTAGTAGAATCTGGCTTACAAGACATAAAATCATCTTTTGAAAGAAAGGACGGTGTACATGCAAAGTCATCTGCTTCTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTTCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAATGTACAGGCTTTACAGGCAAAAGGAACTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAGAGAGAGATCGGAAGATTACGTAGCATGTATCAACAAAATCTGCAGCAATCACATCAGCCTCAACAACAACCATCTGGTAGTCATAGACGCTCGAACAGCAGAGACCTCGACTCTCAGTTTGCTAACCTTTCTCTGAAGCACAAGGACACCAATTCTGGGCACGACCCTGCAAATGGAGCACTAAGAATTTAG 2415 0.4161 MGKKSKSFFSFRRRSKKLQPPQPPPSTLEITGEPSENPKPKKKTAGAKLWMRFDRSGKSELVEWEKNTIIRHSAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKTQPKLLGGGDDNVPEATDGLQSELPLPFEFQVLEIALEVVCTYLDSDVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQVEAHLAATTPNLSSVRRLNSTRSGSLIIGNDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCTLYNINGIFWPAVAIMTAVSVVIFVLVLAYAKWKKLLGSDLESSIYKGIDPASMANSKSSSGIRNLVYTGPGKHAHALLPPKSPFPTISQAYADYVSNPTIGSKPVNKPREGNSHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDTMNNASNIGYADHDEYKYKNFLSIPAWSPPEFDRNKDARHASMYAEMNLAKQKNRSWDSFSNASGVPSGRDSVAFQRSGSPTPSTLYEADRILPTASENHDLVESGLQDIKSSFERKDGVHAKSSASETDSKRAKQQFAQRSRVRKLQYIAELERNVQALQAKGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRSMYQQNLQQSHQPQQQPSGSHRRSNSRDLDSQFANLSLKHKDTNSGHDPANGALRI 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00943 804 MobiDBLite consensus disorder prediction 479 493 - -
Tsu02g00943 804 MobiDBLite consensus disorder prediction 753 804 - -
Tsu02g00943 804 Coils Coil 674 729 - -
Tsu02g00943 804 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 12 409 IPR039204 -
Tsu02g00943 804 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 345 396 IPR045863 -
Tsu02g00943 804 MobiDBLite consensus disorder prediction 753 770 - -
Tsu02g00943 804 Gene3D Magnesium transport protein CorA, transmembrane region 123 340 - -
Tsu02g00943 804 Gene3D - 663 714 - -
Tsu02g00943 804 MobiDBLite consensus disorder prediction 1 45 - -
Tsu02g00943 804 MobiDBLite consensus disorder prediction 645 669 - -
Tsu02g00943 804 MobiDBLite consensus disorder prediction 470 497 - -
Tsu02g00943 804 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 12 409 - -
Tsu02g00943 804 Gene3D - 36 121 - -
Tsu02g00943 804 Coils Coil 214 248 - -
Tsu02g00943 804 CDD Mrs2_Mfm1p-like 50 406 IPR039204 -
Tsu02g00943 804 Pfam CorA-like Mg2+ transporter protein 295 396 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tsu02g00943 804 SMART brlzneu 659 718 IPR004827 GO:0003700|GO:0006355
Tsu02g00943 804 MobiDBLite consensus disorder prediction 645 668 - -
Tsu02g00943 804 SUPERFAMILY Leucine zipper domain 670 712 IPR046347 GO:0003700|GO:0006355
Tsu02g00943 804 CDD bZIP_plant_RF2 663 709 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00943 Tsu-Chr2 7861335 7869953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00943 39 409 MRS2 Gene Family AT3G58970 70.649 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00943 K16075 - cam:101495568 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00943 02 7861335 7869953 Tsu02g00943 02 7861335 7869953 ECH