Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00938 ATGGAGTCTATTTTTGTGCTTCTTATGATTTTTGTTGTGGCTATAAATTCAATCTCAGCAGCACCAAACAATTCTGTGTGTCCAGTTGACATGAATTATGTGTTAACAGTTCCTTGGAACACCTCAACCTGTCTTAACTTTCAACACAAGCAATCACAAAACAAACCACAAACAAGTCTATGTTGTCAAACTTTGTTGTCACTTTTTGGTATAGCATTATCACAAAACCTAAAGAAGAACTCTCTTTTCCAACTTCCAAACCTTCTTACCTCCACCTCATGTCTTCAAGATTTCCAAACTAAACTCAGTTCCATTTCACTTCATAATGATCTTGTGTCTTCATGTTTTGATCCACTTCAATTTGTTATCACTCCTAATATTTGTGCTAGTATTGAAACTAAACAAGATTGGTATAACAAAGTTGGTCCTGCACCATTGTTTAATACTTCATGTAAACCAGACCTTAGTGTTTCTACTAATTGTGATGCATGTGTTAATCAAGGACTTAAGGTTCAAGAGAAGTTGAATCAAATTGATGGTAATAGTTCACATTCTAAAGATTGTTTTTACTTCACTATACTTTATATTGCTGGAGTTGTGAATGATTTTGGACCTGAAAGCAGTGGTGTTATGTCTTGCATTCTTGAATTGCCTCTTAACTCTCAAGCACGTTCGAGAAAAAAGAGCCATCATGCTCTTGTTTTTGGGTTAATTGGAGCTGCAGTTGCATTTATGGTTATCATGTTTTCTTTGTTTGGCTTCTATTTTTGGTACACTAGGGTGGTAAAGAGAAAAAGTACTGTAAATTTTCTAGATTATGCAGCTGATCCAATGGAACAAAGACCTGGCCGAAGAATTAGACCGAAAACAGGATCAATTTGGTTCAAATTTGAAGACCTTGTGAAGGCCACTAACAATTTTTCACTCGAAAACTTTATTGGTAGAGGTGGATTTGGGATAGTTTACAAAGGCATTCTACCTGATAACACAACTGTTGCTGTTAAAAGCATGGAAGTAACTGATTTTCAAGGGGATGATAAGTTCTATACTGAAGTGGAGATTATCAGCAACTTGAAGCACCGGAATCTAGTTCCGTTAAGAGGGTGTTGCGTGGTCGATGAGGATCATAATGAAAAACACAGAAATAGGTATCTTGTTTATGATTATATGCCGAACGGTAACCTCGACGATCATCTCTTTCCATCCATGGAAAATGAAAAGGAATTGTTGACTTGGCCTCgaagaaaaaacataatctTCGATGTGGCGAACGCGTTGGTTTATTTGCACTTTGGAGTTAAACCTGCTATTTATCATAGAGATATCAAAGCTACAAATATACTACTTGATGATGATATGAGAGCAAAGGTTGCAGATTTTGGACTAGCCAAAGAAAGTAGTGAAAGTAGGTCTCAGTTAAATACTAGAGTAGCTGGAACTTATGGATATCTTGCACCAGAATATGCACTTTATGGTCAACTAACTGAGAAGAGTGATGTGTATAGTTTTGGTGTGGTTATTTTGGAGATTATGTGTGGAAGAAAAGCTCTTGAGTTATCTTCATCAGGAACACCTAAATTCTTGATCACAGATTGGGTTTGGTCATTGATGAAAACTGGAAAGATATCAGAGGCTTTGGATGGTTCTATCTTGATGGAGGATGAAAAATCTTCCAATAGTAGAAATATAATGGAAAGGTTTTTGTTGGTTGGAATTTTGTGTTCTCATGTAATAGCTGATTCAAGGCCAACAATTTTGGATGGTTTGAAGATGTTAGAAGGAGACATTGATGTTCCATCAATTCCTGATAGGCCTATGACTCTTGAGCATCATATCAATATGTTCACTAATGCCAATTCAGCAGAACTGTGA 1872 0.3611 MESIFVLLMIFVVAINSISAAPNNSVCPVDMNYVLTVPWNTSTCLNFQHKQSQNKPQTSLCCQTLLSLFGIALSQNLKKNSLFQLPNLLTSTSCLQDFQTKLSSISLHNDLVSSCFDPLQFVITPNICASIETKQDWYNKVGPAPLFNTSCKPDLSVSTNCDACVNQGLKVQEKLNQIDGNSSHSKDCFYFTILYIAGVVNDFGPESSGVMSCILELPLNSQARSRKKSHHALVFGLIGAAVAFMVIMFSLFGFYFWYTRVVKRKSTVNFLDYAADPMEQRPGRRIRPKTGSIWFKFEDLVKATNNFSLENFIGRGGFGIVYKGILPDNTTVAVKSMEVTDFQGDDKFYTEVEIISNLKHRNLVPLRGCCVVDEDHNEKHRNRYLVYDYMPNGNLDDHLFPSMENEKELLTWPRRKNIIFDVANALVYLHFGVKPAIYHRDIKATNILLDDDMRAKVADFGLAKESSESRSQLNTRVAGTYGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALELSSSGTPKFLITDWVWSLMKTGKISEALDGSILMEDEKSSNSRNIMERFLLVGILCSHVIADSRPTILDGLKMLEGDIDVPSIPDRPMTLEHHINMFTNANSAEL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00938 623 Gene3D Transferase(Phosphotransferase) domain 1 390 598 - -
Tsu02g00938 623 ProSiteProfiles Protein kinase domain profile. 307 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00938 623 Pfam Protein kinase domain 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00938 623 Pfam SPARK 23 189 IPR043891 -
Tsu02g00938 623 Gene3D Phosphorylase Kinase; domain 1 278 389 - -
Tsu02g00938 623 SMART serkin_6 307 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00938 623 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 10 606 - -
Tsu02g00938 623 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Tsu02g00938 623 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 606 - -
Tsu02g00938 623 SUPERFAMILY Protein kinase-like (PK-like) 289 592 IPR011009 -
Tsu02g00938 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Tsu02g00938 623 CDD STKc_IRAK 313 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00938 Tsu-Chr2 7827512 7829383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00938 16 610 Receptor kinase-like Gene Family AT1G11050 58.696 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Tsu02g00938 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00938 - - gmx:100788367 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00938 02 7827512 7829383 Tsu02g00938 02 7827512 7829383 ECH