Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00935 ATGAATCCAATTTTGATTCTTTTCATATTCTCTCTCATCATAGTCACAACAGATGCATCATCAAACTCAACATCATGTCCAGTATCTTTGAATTATGTCCAAACAGTTCCTTGGAACAAATCACTTTGTCATAACTTCAAACCTTTACAATCCAAAACAGAAACACAACAAACACTTTGTTGTCAAGCTCTTTTATCTCTCTTTGGTATAGCACTTGCTGAATATCTTAACAAAAACTCACTTTTCCATTTCCATAATATACCTATCTCAGAAGCTTGTTTACATAATTACCAAACTAACCTCACTTCACTTTCACTTCCTAATAATCTTGTTTCTTCATGTTTTGATCCATCTCAGTTTGTTTCAACTCCTAATACATGTGCTCATATTCAAACTAAACAAGATTGGCTTAATAAAGTTGATTCTAATGATTTAAATGTTCTTGATAATGTTTGTGAACCAGATTTAACAGATCCTCATCATTGTCCCGTTTGTCAAAATCAAGGTTTTAAGGTTCAACAGATGCTGACTCAGATTGATGGATTGTTGTATTTTTGGTATATTTGGTGtgtgaagaaaagaaaaaatgaaaatttgttatCTGATAATAGTGGTGGTTCACATGTACCAAGTTTTAGTTTAAGGGTTAGACCGAAAAGTGGgttgatttggtttgattttaaGGATCTTGTGAAGGTTACAGATAATTTTTCGGCCGAAAATTTCATTGGAAGAGGTGGGTTTGGTTCGGTTTACAAAGGGGTTTTACCGGATGGGACTGTTGTTGCGGTTAAAAGGATTGAAGAGTCTGATTATCAAGGCGATGTTGAGTTTTATAGAGAGGTGGGGATTGTTAGTAGTTTGAAGCATCGTAATTTGGTGCCGCTAAGAGGGTGTTGTGTGGTTGGTGAGGATGTGAATCATGAGTATATTGGAAAGTATCTTGTTTATGATTATATGCCGAATGGTAATCTTAAAGACCATCTTTTTCCGGATACGGAGAATCAAAATGTGAAGCAATCTTTGACTTGGTCTCAAAGGAAAAACATAATCTTGGATGTGGCGAACGCGTTGGTTTATTTGCATTTTGGAGTTAAACCACCTGTTTATCACAGAGATATCAAAGCTACCAATATACTACTCGATGCAGGTATGAGAGCAAGGGTTGCAGATTTCGGGCTGGCGAAACAGGACTACAGTCAAAATACGTCTCAGCTAAATACGAGAGTAGCTGGAACTCGCGGATATCTTGCTCCGGAATACGCACTTTATGGTCAGTTAACCGAAAAGAGTGATGTCTATAGCTTTGGTGTGGTTGTTCTAGAGATTATGTGTGGAAAAAAGGCTCTTCAGTTATCTTCGTCCGGAGAGCCTAATTTCTTGATCACAGATTGGGTTTGGTCATTAATGAAATCTGGAAAAATGGATAAGGCTTTGGATGTCTCTATCTCGATGGACGGAAATTCCACTAAAAGCATAATGGAGAGATTTTTAGTGGTTGGAATTTTATGCTGTCATGTAGTGGTTGCTTTAAGGCCCACAATTTTGGATGCTTTGAAGATGTTAGAAGGAGACATTGAGGTTCCATCAATTCCAGATAGGCCAACGACTCTAGGGAACCGCATGTTTGCCAATGGTGATTCAGTTTAA 1650 0.3655 MNPILILFIFSLIIVTTDASSNSTSCPVSLNYVQTVPWNKSLCHNFKPLQSKTETQQTLCCQALLSLFGIALAEYLNKNSLFHFHNIPISEACLHNYQTNLTSLSLPNNLVSSCFDPSQFVSTPNTCAHIQTKQDWLNKVDSNDLNVLDNVCEPDLTDPHHCPVCQNQGFKVQQMLTQIDGLLYFWYIWCVKKRKNENLLSDNSGGSHVPSFSLRVRPKSGLIWFDFKDLVKVTDNFSAENFIGRGGFGSVYKGVLPDGTVVAVKRIEESDYQGDVEFYREVGIVSSLKHRNLVPLRGCCVVGEDVNHEYIGKYLVYDYMPNGNLKDHLFPDTENQNVKQSLTWSQRKNIILDVANALVYLHFGVKPPVYHRDIKATNILLDAGMRARVADFGLAKQDYSQNTSQLNTRVAGTRGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGKKALQLSSSGEPNFLITDWVWSLMKSGKMDKALDVSISMDGNSTKSIMERFLVVGILCCHVVVALRPTILDALKMLEGDIEVPSIPDRPTTLGNRMFANGDSV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00935 549 ProSiteProfiles Protein kinase domain profile. 237 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00935 549 CDD STKc_IRAK 243 524 - -
Tsu02g00935 549 Pfam Protein kinase domain 239 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00935 549 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 181 - -
Tsu02g00935 549 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 183 535 - -
Tsu02g00935 549 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Tsu02g00935 549 SMART serkin_6 237 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00935 549 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 12 181 - -
Tsu02g00935 549 Gene3D Transferase(Phosphotransferase) domain 1 320 529 - -
Tsu02g00935 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Tsu02g00935 549 Pfam SPARK 21 178 IPR043891 -
Tsu02g00935 549 SUPERFAMILY Protein kinase-like (PK-like) 213 523 IPR011009 -
Tsu02g00935 549 Gene3D Phosphorylase Kinase; domain 1 209 319 - -
Tsu02g00935 549 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 183 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00935 Tsu-Chr2 7817546 7819408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00935 217 549 Receptor kinase-like Gene Family AT1G11050 67.449 1.12e-155 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Tsu02g00935 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00935 - - gmx:100788367 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00935 02 7817546 7819408 Tsu02g00935 02 7817546 7819408 ECH