Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00920 ATGAAGATATTCTTCATTCCTGGAAATGTTTTGTTATCAAACCTCTTACTAATGATTTCCATCACTGCTATTATTAATGCAGAATACAAAGAAGCAGATTACATGTCCAACCTTATGAAAGCACTGAATCCAACTCCCACAGGATGGTCTAACAACACTAACTACTGCAAATGGAAAGGCATCTCTTGCGACTTTAGTCAAGTTGTTACCTCCATCATGCTCCCATCAAGTTCACTCACCGGAACACTCCCTCTCCGTGTAAACACTCTCAAAAATCTCACCCACATTGATCTCCACAACAATTCACTCACCGGTCCCTTGCCTTATTTGGATAGGCTCTACATGCTCCAAACAATATCCCTTGGTCATAATAACTTCACCTCCATCCCAGATAGTTGCTTTTATGCCATAAAAGATCTCAAAACCCTCAACCTTAGCAATAACTTGAATCTCCACTCTTGGGTATTTCCTATCAAAGATTTATCTTTCTCCACTTCTTTGGAAATCCTCGATCTCAAAGCTACGAATATGATTAGCTCATTAGAATCAGAAATGTTCAATTCGTTTCCAAATTTGCATACTTTTATTATTTCTCACAACAAAATGGACGGAAATCTACCCGAGTCTCTCCGAAAATCTGCAGTAAGGTATTTACAACTTAACAACCAGGGGGGATATGGATTTACATGTACAATCGACGTTATATCAAGTATGAGTAATTTATCTCAAGCGTGGCTTCACAATAACACCTTCACAGGTCGAATTCCCAACCTGTCGAATTGTACTAATTTGTTTGATTTGCAGCTTCACTCAAATAGGTTAACTGGTTTGATCCCACCTTCCTTGCTAACTCTATCTAGCTTGAACATCATCTCTTTGGACAACAATATGCTTCAAGGACCAATACCTATGTTTCGTGAGGGTGTTAATGCAACATGGGAGTCAAATTCCTTTTGTCGAAGCGATATTGGACCTTGTGATTCTCAGGTTATGATTTTGCTTGAAATTTTTGAAGCTTTAGAGTCTCCTTATTTTCTGATAATTAAAGGGAACAATGCTTGCTCCGGAGGGTGGGTCGACGATGTCTTGATTAGGTGTGAAAGAGGGAAAATTGTTAGTTTTAAAatatggaattttattttaagaggaACCATCTCTCCGACATTTTCCAATTTAACAAGTTTAGTGAACTTGACTCTTGCTGACAATTCTTTAACGGGTTCAATACCATACGCTCTTACAACTTTGCATAAACTTCAGCTTCTTGATGTTTCCAATAATAATCTATCAGGACCAATTCCGACATTTTCATCCGAGGTTATGTTAAATACCACTGGGAATCCTTTGCTTGGCCAAACTGGAGGTTCATCTAAAATAAACCTTAGGTCTATAATTTGGATTGCAGGGGCATTTGGCGTTGGATTCGTCATACTTATTGTGTTGATTATTTGTAAACGTAAGAGATATCATATTTTGGTAACAAAAAAATCTGTTGATCACAATGTGGAGGATTTCATCCAGAGTTATAACTTGTCAGTGCCAATTAAGCAATATAGATATTCAGAAGTTAAAAGAATGACAAACTCATTTCGGGACAAATTAGGTCAAGGAGGATACGGTGTTGTTTACAAAGCAAGTTTACCTGATGGACGTCAAGTGGCAGTGAAAGTGATAAACGAGTCAATGGGAAATGGAGAAGAATTCATAAATGAAGTTGCGAGTATTAGTAGAACATCACACGTGAACATCGTTTCACTTTTAGGTTTTTGTTATGAGAACAAAAGAGCACTAATATATGAATTCATGTCTAAAGGGTCATTGGATAAGTTTATCCTTAAAAGAGGAGTTCCTTATGCAATTTGTAGTTTGGATTGGAACACAATGTACCAAATTGCGATCGGCATTGCTCGAGGACTAGAGTACTTGCATGAAGGATGTATTTCAAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTGGATGAAGATTTTTGCCCAAAAATCTCTGATTTTGGACTAGCTAAAATATGCCAAAGGAATGATAGTATTGTGTCCATGCATGGAACAAGAGGAACTATAGGATACATAGCACCAGAAGTATTTAGCCGAACATATGGTGGAGTTTCTCACAAGTCTGATGTATATAGTTATGGTATGTTAATTCTAGAAATGATTGGAGGAAGAAAGAATTACGACACTGGAGGTTCATGTACTTCTGAAATGTACTTTGCAGAATGGATTTATAAGGATCTTGAACAAGGTAATAACAATCTTGAGAATTGTTTAGCAAATTCATATGAAGAAAATGatatggtgagaaagatgtCTATGGTGAGTCTATGGTGCATTCAAATCAATCCATCAGATAGACCATCAATAAGTAAAGTAATAGAAATGTTACAAGGACCACTTCAGTCAGTGTCATATCCTCCAAAGCTTTTCTTACATTCTCCTGAAGTTCCATCATTACAAACTTCATATGTATCTTCTAGCAATTTGTTAAAGACAAACCCAGCAAAGACAGTAGTGAAAATGTGA 2544 0.3628 MKIFFIPGNVLLSNLLLMISITAIINAEYKEADYMSNLMKALNPTPTGWSNNTNYCKWKGISCDFSQVVTSIMLPSSSLTGTLPLRVNTLKNLTHIDLHNNSLTGPLPYLDRLYMLQTISLGHNNFTSIPDSCFYAIKDLKTLNLSNNLNLHSWVFPIKDLSFSTSLEILDLKATNMISSLESEMFNSFPNLHTFIISHNKMDGNLPESLRKSAVRYLQLNNQGGYGFTCTIDVISSMSNLSQAWLHNNTFTGRIPNLSNCTNLFDLQLHSNRLTGLIPPSLLTLSSLNIISLDNNMLQGPIPMFREGVNATWESNSFCRSDIGPCDSQVMILLEIFEALESPYFLIIKGNNACSGGWVDDVLIRCERGKIVSFKIWNFILRGTISPTFSNLTSLVNLTLADNSLTGSIPYALTTLHKLQLLDVSNNNLSGPIPTFSSEVMLNTTGNPLLGQTGGSSKINLRSIIWIAGAFGVGFVILIVLIICKRKRYHILVTKKSVDHNVEDFIQSYNLSVPIKQYRYSEVKRMTNSFRDKLGQGGYGVVYKASLPDGRQVAVKVINESMGNGEEFINEVASISRTSHVNIVSLLGFCYENKRALIYEFMSKGSLDKFILKRGVPYAICSLDWNTMYQIAIGIARGLEYLHEGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRNDSIVSMHGTRGTIGYIAPEVFSRTYGGVSHKSDVYSYGMLILEMIGGRKNYDTGGSCTSEMYFAEWIYKDLEQGNNNLENCLANSYEENDMVRKMSMVSLWCIQINPSDRPSISKVIEMLQGPLQSVSYPPKLFLHSPEVPSLQTSYVSSSNLLKTNPAKTVVKM 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00920 847 SMART serkin_6 528 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00920 847 SUPERFAMILY Protein kinase-like (PK-like) 516 833 IPR011009 -
Tsu02g00920 847 Pfam Leucine rich repeat 116 151 IPR001611 GO:0005515
Tsu02g00920 847 Pfam Protein kinase domain 532 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00920 847 Pfam Leucine rich repeat N-terminal domain 38 64 IPR013210 -
Tsu02g00920 847 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 840 IPR045874 GO:0004672
Tsu02g00920 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Tsu02g00920 847 PANTHER TYROSINE KINASE FAMILY PROTEIN 19 840 - -
Tsu02g00920 847 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Tsu02g00920 847 Gene3D Phosphorylase Kinase; domain 1 502 601 - -
Tsu02g00920 847 Gene3D Ribonuclease Inhibitor 31 326 IPR032675 -
Tsu02g00920 847 Gene3D Transferase(Phosphotransferase) domain 1 602 811 - -
Tsu02g00920 847 ProSiteProfiles Protein kinase domain profile. 528 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g00920 847 SUPERFAMILY L domain-like 50 451 - -
Tsu02g00920 847 Coils Coil 750 770 - -
Tsu02g00920 847 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00920 Tsu-Chr2 7669124 7672263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00920 435 837 Receptor kinase-like Gene Family AT4G18250 48.810 6.06e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu02g00920 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00920 - - cam:101489592 1058.9